diff --git a/workflow_zymo/Snakefile b/workflow_zymo/Snakefile index abffb2a29be1c653635dc728a2c995d763cafcb3..349fdc2eaf51857c3afc1804748a1a2122548ea1 100644 --- a/workflow_zymo/Snakefile +++ b/workflow_zymo/Snakefile @@ -167,7 +167,7 @@ rule analysis_diamond: "(date && " "daa={output.daa} && " "diamond blastp -q {input.faa} --db {input.db} --out {output.daa} -p {threads} --outfmt 100 && " - "diamond view --daa ${{daa%.*}} --max-target-seqs 1 -p {threads} --outfmt {params.outfmt} --out {output.tsv} && " + "diamond view --daa ${{daa%.*}} --max-target-seqs 1 -p {threads} --outfmt {params.outfmt} --out {output.tsv} --id 90 --query-cover 90 --subject-cover 90 --more-sensitive && " "date) &> {log}" rule get_headers: