From 26bb5572e546160167907462fff904de319fa019 Mon Sep 17 00:00:00 2001 From: Sofia Farina <sofia.farina@uni.lu> Date: Wed, 21 Jun 2023 11:53:20 +0200 Subject: [PATCH] Update README.md --- README.md | 8 +++++--- 1 file changed, 5 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index b85058e..b36b5d2 100644 --- a/README.md +++ b/README.md @@ -1,9 +1,11 @@ This repository contains the code to replicate the results presented in the paper titled "Mechanistic multiscale modelling of energy metabolism in human astrocytes indicates morphological effects in Alzheimer's Disease". [ Reference Farina et al. DOI: https://doi.org/10.1101/2022.07.21.500921 ] +The three folder contains the code to replicate the three section of results of the manuscript. To run Experiment 1 and Experiment 2, it is required to have Python 3.9.2 and Fenics 2019.1.0 (2019). -While Experiment 3 requires Python 2.7.6, Fenics 1.5 (2005) and the CutFEM library [Burman et al. 2015]. -The astrocytic images ready to be used in Experiment 3 code can be found in the following repository: https://owncloud.lcsb.uni.lu/s/GU19CSszjbkhQ8D accesible by emailing alexander.skupin@uni.lu -For more information please contact the author: Sofia Farina \ No newline at end of file +To run Experiment 3, it is required Python 2.7.6, Fenics 1.5 (2005) and the CutFEM library [Burman et al. 2015]. +The astrocytic images, ready to be used in Experiment 3, for the control and reactive are included in the respective folders as numpy array. + +For more information please contact the first author: Sofia Farina or the corresponding author: Alexander Skupin -- GitLab