From 26bb5572e546160167907462fff904de319fa019 Mon Sep 17 00:00:00 2001
From: Sofia Farina <sofia.farina@uni.lu>
Date: Wed, 21 Jun 2023 11:53:20 +0200
Subject: [PATCH] Update README.md

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 This repository contains the code to replicate the results presented in the paper titled "Mechanistic multiscale modelling of energy metabolism in human astrocytes indicates morphological effects in Alzheimer's Disease".
 [ Reference Farina et al. DOI: https://doi.org/10.1101/2022.07.21.500921 ]
 
+The three folder contains the code to replicate the three section of results of the manuscript.
 
 To run Experiment 1 and Experiment 2, it is required to have Python 3.9.2 and Fenics 2019.1.0 (2019).
-While Experiment 3 requires Python 2.7.6, Fenics 1.5 (2005) and the CutFEM library [Burman et al. 2015].
-The astrocytic images ready to be used in Experiment 3 code can be found in the following repository: https://owncloud.lcsb.uni.lu/s/GU19CSszjbkhQ8D accesible by emailing alexander.skupin@uni.lu
 
-For more information please contact the author: Sofia Farina
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+To run Experiment 3, it is required Python 2.7.6, Fenics 1.5 (2005) and the CutFEM library [Burman et al. 2015].
+The astrocytic images, ready to be used in Experiment 3, for the control and reactive are included in the respective folders as numpy array.
+
+For more information please contact the first author: Sofia Farina or the corresponding author: Alexander Skupin
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