From 9f68a25c1c1aeb35605e7c03054ec0a4ee093b65 Mon Sep 17 00:00:00 2001
From: Shaman <shaman.narayanasamy@uni.lu>
Date: Thu, 26 Mar 2015 23:42:56 +0100
Subject: [PATCH] New MT-only assembly rule
---
rules/Assembly/master.rules | 8 ++++++++
1 file changed, 8 insertions(+)
diff --git a/rules/Assembly/master.rules b/rules/Assembly/master.rules
index 33be5ed..519fc3e 100644
--- a/rules/Assembly/master.rules
+++ b/rules/Assembly/master.rules
@@ -17,3 +17,11 @@ rule ASSEMBLY:
assembly_output_files()
shell:
"echo 'Assembly Done'"
+
+# MT ASSEMBLY command
+rule ASSEMBLY_MT_ALL:
+ input:
+ "%s/MT.assembly.cat.fa" % A_OUT
+ shell:
+ "echo 'MT Assembly Done'"
+
--
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