diff --git a/IMP b/IMP index 3930f4bb3835490c58b44952f683b3a0c54f087c..36c0adf3a1dac77fb5ee9c2e71bc4af02e305ffd 100755 --- a/IMP +++ b/IMP @@ -151,7 +151,7 @@ def run(args): cmd = ' '.join(cmd) else: if not args['COMMANDS']: - args['COMMANDS'] = 'snakemake ALL' + args['COMMANDS'] = ['snakemake', 'ALL'] cmd = ' '.join(cmd) + format_command(' '.join(args['COMMANDS']), '/output') print("Executing", '"', cmd, '"')