Issues · IMP / IMP

New issue

install issue

#162 · created May 14, 2021 by Edward-Tristan
- 0
updated May 14, 2021
Installation error

#161 · created Apr 12, 2021 by Edward-Tristan
- 0
updated Apr 12, 2021
IMP image not installed

#160 · created Jan 17, 2021 by songb1230
- 0
updated Jan 17, 2021
can't find trimmomatic

#153 · created Feb 15, 2019 by Billy Taj
- 2
updated Apr 29, 2020
CalledProcessError in line 59 of /home/imp/code/rules/Preprocessing/filtering.rules:

#151 · created Jan 16, 2019 by TANKENGUO
- 1
updated Jan 16, 2019
git clone results in HTTPS error

#149 · created Dec 05, 2018 by Shea Connell
- 1
updated Jan 09, 2019
Does skip_preprocessing work (snakemake)?

#147 · created Nov 16, 2018 by Javier Tamames
- 0
updated Nov 20, 2018
IMP-specific prokka conda recipe needed

#141 · created Oct 02, 2018 by Cedric Laczny Important conda
- 1
updated Oct 04, 2018
Why are Fasta index and BAM index not created by distinct rules, but in the variant_calling rule?

#140 · created Oct 01, 2018 by Cedric Laczny Important bug
- 1
updated Oct 01, 2018
Error in idba_hybrid_assembly_2

#139 · created Sep 24, 2018 by Cedric Laczny bug
- 0
updated Sep 24, 2018
samtools-1.9 might break host filtering step

#137 · created Sep 21, 2018 by Cedric Laczny Important Update
- 4
updated Oct 08, 2018
Accelerating the rRNA filtering step

#136 · created Sep 14, 2018 by Cedric Laczny Enhancement
- 5
updated Oct 10, 2018
Read preprocessing using fastp

#135 · created Aug 14, 2018 by Cedric Laczny Enhancement Potential request
- 1
updated Oct 08, 2018
idba hybrid assembly error

#134 · created May 10, 2018 by Adam Blanchard
- 0
updated May 21, 2018
Error in cap3

#132 · created Apr 13, 2018 by easternbluebird
- 5
updated May 06, 2018
Singularity support?

#131 · created Mar 21, 2018 by Scott Daniel
- 2
updated May 03, 2018
How can I rebuild the docker file?

#130 · created Mar 12, 2018 by easternbluebird
- 7
updated Mar 12, 2018
Update prokka

#129 · created Mar 02, 2018 by easternbluebird
- 1
updated May 03, 2018
Update megahit

#128 · created Mar 02, 2018 by easternbluebird
- 0
updated Mar 02, 2018
CalledProcessError in line 28 of /home/imp/code/rules/Analysis/visualize_mg.rules

#127 · created Feb 14, 2018 by Fredrik Boulund
- 5
updated Feb 15, 2018