external/exchange-channels/lft/lft.md

@@ -34,35 +34,35 @@ The use of LFT is mediated by LCSB's data stewards. If you require assistance in
 
 In the following steps we provide instructions on how to use LFT web interface.
 
-1. Once you receive your **access link** and **password** from the LCSB, visit the link using a standard web browser. Firefox 66.x (or higher) is recommended, but others should also work. You will be prompted for your password (see below).<br/><br>
- ![Alt](img/lft_password.png "Password request")
-
-2. When you visit an LFT access link for the very first time, you will be prompted to install or update **IBM Aspera Connect** client.
-
-* click **Install Connect** button (see below). <br/>![Alt](img/lft_install.png "Install Aspera Connect")
-* open the installer just downloaded and start the installer. <br/>![Alt](img/lft_installAsperaConnect.png "Run installation of Aspera Connect")
-* close the installer - *depending on your Operating System the Aspera Connect can try to open and you may be asked if you are sure to open it* -
-* the prompt should disappear and you should see the following message <br/>![Alt](img/lft_AsperaConnectInstalled.png "Aspera Connect is installed")
-
-3. The **access link** page will display a **File Browser** section. Depending on the settings per access link, users can create or delete folders in the File Browser and upload and/or download data.
-
-  ![Alt](img/lft_fileBrowser.png "File Browser")
-
+1. Once you receive your **access link** and **password** from the LCSB, visit the link using a standard web browser. Firefox 66.x (or higher) is recommended, but others should also work. You will be prompted for your password.<br><br>
+![Alt](img/lft_password.png "Password request previous")<br>
+
+2. When you access an LFT link for the very first time, you will be prompted to install **IBM Aspera Connect** client.<br>
+ * click **Install Connect** button (see below); <br>
+ ![Alt](img/lft_install.png "Install Aspera Connect")
+ * open the installer and start it; <br>
+ ![Alt](img/lft_installAsperaConnect.png "Run installation of Aspera Connect")
+ * close the installer;
+ > *depending on your Operating System the Aspera Connect can try to open and you may be asked if you are sure to open it*
+ * the prompt should disappear and you should see the following message. <br>
+ ![Alt](img/lft_AsperaConnectInstalled.png "Aspera Connect is installed")
+
+3. The **access link** page will display a **File Browser** section. Depending on the settings per access link, users can create or delete folders in the File Browser and upload and/or download data.<br><br>
+![Alt](img/lft_fileBrowser.png "File Browser")
+
+{:start="4"}
 4. Clicking **Upload** or **Download** icons will launch the **IBM Aspera Connect** client on your computer. You first will be asked whether you allow the client to connect to the server. Choose **Allow**.
-> Note: to download file/folder you need to select it first.
+> to download file/folder you need to select it first
 
-5. At any time you can launch **IBM Aspera Connect** to display the status of uploads to or downloads from your computer. <br/>
 
+5. At any time you can launch **IBM Aspera Connect** to display the status of uploads to or downloads from your computer. <br><br>
   ![Alt](img/lft_status.png "Aspera Connect status")
 
-6. All data are encrypted on server side and they stay encrypted also upon download. For decryption, you have to navigate into your **IBM Aspera Connect** window and click "**Unlock encrypted files**". <br/>
-
-  ![Alt](img/lft_AsperaConnect.png "IBM Aspera Connect") <br/>
-
-You will be prompted for encryption passphrase which is present on the file browser (click on the copy icon to copy into clipboard).
-
-  ![Alt](img/lft_encryptionPassword.png "Encryption password") <br/>
-  ![Alt](img/lft_AsperaCrypt.png "File decryption") <br/>
+6. All data are encrypted on server side and they stay encrypted also upon download. For decryption, you have to navigate into your **IBM Aspera Connect** window and click "**Unlock encrypted files**". <br><br>
+  ![Alt](img/lft_AsperaConnect.png "IBM Aspera Connect") <br><br>
+You will be prompted for encryption passphrase which is present on the file browser (click on the copy icon to copy into clipboard).<br><br>
+  ![Alt](img/lft_encryptionPassword.png "Encryption password") <br>
+  ![Alt](img/lft_AsperaCrypt.png "File decryption") <br><br>
 Encrypted files are by default kept on your disc after decryption. If you want to change this behaviour, navigate to Options->Settings and check "Delete encrypted files when finished" box.
 
 7. You can also navigate to the help section on the top of the browser. It contains information and links to get support.
@@ -82,37 +82,42 @@ In the following steps we provide instructions on how to use LFT command line.
 | MacOS	| `$HOME/Applications/Aspera\ Connect.app/Contents/Resources/aspera_tokenauth_id_rsa` | `/Applications/Aspera\ Connect.app/Contents/Resources/aspera_tokenauth_id_rsa` |
 | Windows | `C:\\Program Files (x86)\Aspera\Aspera Connect\etc\aspera_tokenauth_id_rsa` |`C:\\Users\username\AppData\Local\Programs\Aspera\Aspera Connect\etc\aspera_tokenauth_id_rsa` |
 | Linux | `$HOME/.aspera/connect/etc/aspera_tokenauth_id_rsa` | `/opt/aspera/etc/aspera_tokenauth_id_rsa` |
-| Iris | `/opt/apps/resif/data/production/$PROD_VERSION/default/software/tools/Aspera-CLI/$CLI_VERSION/etc/aspera_tokenauth_id_rsa` | |
+| HPC @ Uni.lu | `$EBROOTASPERAMINCLI/etc/aspera_tokenauth_id_rsa` | |
 
+{:start="3"}
 3. Go to the help section of your access link.
 
-![Alt](img/lft_help.png "Help section") <br/>
+![Alt](img/lft_help.png "Help section") <br>
 
 And follow instructions there. Export variables and execute the command to download/upload data.
 
-![Alt](img/lft_command.png "Help command line") <br/><br/>
+![Alt](img/lft_commands.png "Help command line") <br><br>
 
 <a name="LFT_TROUBLESHOOTING"></a>
+
 ## Troubleshooting
 
 You can use the official [IBM Aspera Diagnostic Tool](https://test-connect.asperasoft.com/) to troubleshoot your connectivity issues.
 
-### **Using Microsoft Edge browser**
+### UDP/TCP port and firewall
 
-Microsoft Edge browser requires to download and install [IBM Aspera Connect for Edge](https://microsoftedge.microsoft.com/addons/detail/ibm-aspera-connect/kbffkbiljjejklcpnfmoiaehplhcifki).
-
-### **UDP/TCP port and firewall**
-
-> **IMPORTANT NOTE:** Aspera requires UDP ports to be enabled on firewalls.
+> **IMPORTANT:** Aspera requires UDP ports to be enabled on firewalls.
 
 Specifically your firewall should:
 
-* Allow outbound connections from the Aspera client on the TCP port (TCP/33001, by default, when connecting to a Windows server, or on another non-default port for other server operating systems).
-* Allow outbound connections from the Aspera client on the fasp UDP port (33001, by default).
-* If you have a local firewall on your server (like Windows Firewall), verify that it is not blocking your SSH and fasp transfer ports (e.g. TCP/UDP 33001).
+* allow outbound connections on TCP port 9092 from the Aspera client to aspera-hts-01.lcsb.uni.lu (158.64.79.146 is the public IP) for the web interface
+* allow outbound connections on TCP and UDP port 33001 from the Aspera client to aspera-hts-01.lcsb.uni.lu (158.64.79.146 is the public IP) for fasp transfer
 
 Detailed information on how to configure firewalls when working with Aspera is given [here](https://download.asperasoft.com/download/docs/p2p/3.5.1/p2p_admin_win/webhelp/dita/configuring_the_firewall.html).
 
+### Using Microsoft Edge browser
+
+Microsoft Edge browser requires to download and install [IBM Aspera Connect for Edge](https://microsoftedge.microsoft.com/addons/detail/ibm-aspera-connect/kbffkbiljjejklcpnfmoiaehplhcifki).
+
+### Error "Passphrase doesn't match"
+
+You are using wrong encryption passphrase. Check that you use the encryption passphrase from the correct link, update variables in your script, if any.
+
 ### Command-Line error "command not found: ascp" ###
 
 Run `ascli config ascp show` to show path of `ascp`.
@@ -121,4 +126,4 @@ Modify command with the path instead of `ascp`.
 
 Here is an example of download command
 
-`<path-to-ascp-executable> -d -i $SSHKEY -P 33001 --file-crypt decrypt -W $TOKEN $ASPERA_USERNAME@aspera-hts-01-srv.lcsb.uni.lu:/<remote-dir> </local-dir>`
+`<path-to-ascp-executable> -d -i $SSHKEY -P 33001 --file-crypt decrypt -W $TOKEN $ASPERA_USERNAME@aspera-hts-01-srv.lcsb.uni.lu:/<remote-dir> </local-dir>`
\ No newline at end of file

external/exchange-channels/owncloud/owncloud.md

@@ -16,7 +16,7 @@ redirect_from:
 
 ## Obtaining a LUMS account
 
-A LUMS (LCSB User Management System) account is needed in order to use LCSB ownCloud. LUMS accounts for LCSB staff are normally created within the first few days of starting work at the LCSB. In addition to staff, researchers at Partner Institutes may be given LUMS accounts. If you want to create a LUMS account, or require support, you should contact [LCSB admin team](mailto:lcsb-sysadmins@uni.lu).
+A LUMS (LCSB User Management System) account is needed in order to use LCSB ownCloud. LUMS accounts for LCSB staff are normally created within the first few days of starting work at the LCSB. In addition to the staff, researchers at partner institutes may be given LUMS accounts. To create a LUMS account, please open a ticket on [ServiceNow](https://service.uni.lu/) under the category LCSB IT -> BioCore -> Account Management Services -> [LUMS - New account](https://service.uni.lu/sp?id=sc_cat_item&sys_id=c536257ddb336010ca53454039961936&sysparm_category=6b76697ddb336010ca534540399619f8).
 
 ## Using LCSB ownCloud
 
@@ -26,7 +26,7 @@ Similar to other cloud storage systems, ownCloud is accessible both via a browse
 
 ![LCSB ownCloud web login](img/owcld_1.png)
 
-You can download the ownCloud client suitable for your staff computer [here](https://owncloud.com/desktop-app/). User documentation on ownCloud tools and portal can be found [here](https://doc.owncloud.com/server/client_releases.html).
+User documentation on ownCloud tools and portal can be found [here](https://doc.owncloud.com/).
 
 When sharing research data, one should observe the following guidance using Owncloud:
 
@@ -47,13 +47,11 @@ When sharing research data, one should observe the following guidance using Ownc
 
 ## Installing Owncloud Desktop Client
 
-**Important:** OwnCloud is fetching information from LUMS, therefore changes like a password reset (see How-to cards [Changing password for LUMS accounts]({{ '/?lums-passwords' | relative_url }}) should be performed **only** via LUMS!
+**Important:** OwnCloud is fetching information from LUMS, therefore changes like a password reset (see How-to cards [Changing password for LUMS accounts]({{ '/?lums-passwords' | relative_url }})) should be performed **only** via LUMS!
 
-1. Please try following link to download the owncloud desktop client depending on your operating system (this is an example for Windows, similar steps for other OS) -
+1. Please try following link to download the Owncloud Desktop Client depending on your operating system (this is an example for Windows, similar steps for other OS) - [Owncloud Client](https://owncloud.com/desktop-app/)
 
-    [OwncloudClient](https://owncloud.org/download/#owncloud-desktop-client)
-
-2. Start the owncloud client installation by clicking twice on the downloaded file
+2. Start the Owncloud client installation by clicking twice on the downloaded file
 
 3. Owncloud Setup Wizard will pop-up, like below image -
 
@@ -73,7 +71,7 @@ When sharing research data, one should observe the following guidance using Ownc
 
 **Note**- If you do not have admin rights, please ask SIU to provide you the admin rights on the laptop or do the installation for you.
 
-8. Click **Finish** when the owncloud setup wizard completes -
+8. Click **Finish** when the Owncloud setup wizard completes -
 
     <img src="img/setup-wizard-complete.png" height="300px"><br/>
 

external/general/getToLCSB/getToLCSB.md

@@ -13,6 +13,10 @@ redirect_from:
 
 ![](img/LCSB.jpg)
 
+| House of Biomedicine (BT1)     | Biotech II (BT2)               |
+| ------------------------------ | ------------------------------ |
+| 7, avenue des Hauts-Fourneaux, L-4362 Esch-sur-Alzette  | 6, avenue du Swing, L-4371 Belvaux |
+| N 49°30'5.62'', E 5°56'57.14'' | N 49°29'59.73'', E 5°57'7.271  |
 
 ### 1. Arriving by plane at Luxembourg airport:
 The Luxembourg airport, called Findel, is 34 km away from the University Campus BELVAL where LCSB is located.
@@ -56,13 +60,13 @@ Biotech II (LCSB II) is right next to ADEM (Agence pour le développement de l'e
 Since Campus Belval is foreseen to be a green car-free Campus, parking may not be easy. Due to the constructions around
 our buildings, we currently cannot offer visitor parking. To park your car we recommend using one of the following. From
 either site it is less than five minute walk to either of our buildings.
-- University parking “Mason du savoir” has outdoor and indoor areas<br>
+- University parking “Mason du Savoir” has outdoor and indoor areas<br>
 Price: first 15 min free, first 2 hours 0.8€/hour, afterwards 1€/hour<br>
 - Belval Plaza has 2 parking garages<br>
-Price: first 3 hours free, afterwards 3€/hour (from 07:00 to 20:00) and 1€/hour (from 20:00 to 07:00)
+Price: Between 7:00 - 18:00, the first hour is free and an additional free hour is earned by shopping at a store in Belval Plaza and scanning the parking ticket at the store. Afterwards, 3€/hour until 18:00. After 18:00, the first hour is free, the second hour is 4€ and the rest of the night is 3€/hour. 
 - Belval-Gare [Park&Rail] parking garage<br>
-Price: 1€/hour (from 06:00 to 19:00) and 0.6€/hour (from 19:00 to 06:00)
-- ALDI parking (small parking, convinient for short visit of BT2 and Rouden Eck)<br>
-Price: first 90 min free, next 1 hour 2€, afterwards 3€/hour
+Price: 0.6€/30 min. (from 06:00 to 19:00) and 0.3€/30 min. (from 19:00 to 06:00). Monthly pass can be obtained at the CFL Store for 85€.
+- ALDI parking (small parking, convenient for short visit of BT2 and Rouden Eck)<br>
+Price: first 90 min free, next hour 2€, afterwards 3€/hour
 
 ![](img/map.jpg)

external/general/glossary/glossary.md

@@ -19,14 +19,20 @@ Are you sometimes confused with all the abbreviations and names in and around th
 |AsperaWeb|-|Software for end-to-end encrypted data transfer at the LCSB|
 |Atlas|-|Server of the LCSB|
 |BT1 & BT2|House of Biomedicine/Biotech 1&2|Indication of the different buildings of the LCSB|
+|BTL|House of Biomedicine/Biotech L |Indication of a building of the LCSB ("Roudeneck", the same building as Aldi)|
+|CA|Consortium Agreement|
 |CFL|Chemins de Fer Luxembourgeois|Operator for public transport (train, bus) in Luxembourg|
 |CHL|Centre Hospitalier de Luxembourg|Central Hospital in Luxembourg city – also collaborating with the LCSB|
 |CNER|Comité National d’Ethique de Recherche|National committee for ethical approval or research projects|
 |CNS|Caissee Nationale de Santé|National health insurance company in Luxembourg|
 |DAISY|DAta Information SYstem  |Comprehensive tool to manage your research data in a GDPR-compliant manner. For access, [login with you UNI.LU-account at DAISY](https://daisy.lcsb.uni.lu).|
 |DLSM|Department of Life Science and Medicine|Department of the FSTM, formerly called LSRU|
-|DTU|Doctoral Training Unit|Umbrella for organization of PhD students from different groups working on a common project|
 |Docebo|-|Internal learning platform of the LCSB. [Visit Docebo](https://unisupport.docebosaas.com/learn/signin)|
+|DSA|Data Sharing Agreement|
+|DTA|Data Transfer Agreement|
+|DTU|Doctoral Training Unit|Umbrella for organization of PhD students from different groups working on a common project|
+|DUA|Data Use Agreement|
+|ELSI|Ethical, Legal and Social Implications|
 |ESS|Employee Self-Service|Platform to change your personal data and view your employee profile. Accessible via the intranet |
 |Fiori|-|View your payslips and request holidays. Only accessible when logged into the internal network: [click here](https://fiori.uni.lu/fiori/)|
 |FNR|Fonds National de la Recherche|Main funder of research activities in Luxembourg investing both public funds and private donations|
@@ -38,7 +44,9 @@ Are you sometimes confused with all the abbreviations and names in and around th
 |LIST|Luxembourg Institute of Science and Technology|Research Institute at Belval Campus developing market-oriented services and prototypes|
 |LSRU|Life Science Research Unit|Former name for a department of the FSTM. Now called DLSM|
 |LUMS|LCSB User Management System|Provides you access to most LCSB internal software. **Requires an additional account besides your UNI.LU-login!**|
+|M(D)TA|Material (and Data) Transfer Agreemnent|
 |MSA|Maison du Savoir|Central building of the University of Luxembourg also hosting administration|
+|NDA|Non-Disclosure Agreement|
 |OWA|Outlook Web Access|To check your emails from anywhere via a web-browser. Login with you UNI.LU-credentials at [owa.uni.lu](https://owa.uni.lu)|
 |R3|Responsible and Reproducible Research|Initiative of the Bioinformatics Core group to raise research quality|
 |SAP|Systeme, Anwendungen und Produkte|Software for data management and information exchange|
@@ -46,6 +54,7 @@ Are you sometimes confused with all the abbreviations and names in and around th
 |SIU|Service Informatique de l’Université|Unit that organizes, administrates and develops IT platforms & systems at the University of Luxembourg|
 |Slack|-|Online-based instant messaging platform to organize and work on projects together|
 |SOP|Standard Operation Procedure|Internal guideline how common tasks should be executed|
+|ToS|Terms of Service|
 |VM|Virtual Machine|Entire operating system running inside another operating system.|
 |VPN|Virtual Private Network|Allows you to connect to the internal university pages, services and servers via a program (client) upon login with your university credentials|
 

external/general/links/important_links.md

@@ -17,14 +17,14 @@ This is an overview on websites to manage work and help you with the navigation
 | Link | Description |
 | :------ | :------ |
 |[www.uni.lu](https://www.uni.lu)|General website of the University. You can find general information as well as specific information on the faculties and institutes here.|
-|[uniluxembourg.sharepoint.com](https://uniluxembourg.sharepoint.com/) / [uniluxembourg.sharepoint.com/sites/lcsb/lscb_internal](https://uniluxembourg.sharepoint.com/sites/lcsb/lscb_internal/SitePages/default.aspx)|The internal platform of the University / the LCSB **Please note:** This site can only be accessed when you are logged into the university network, either in your office or via a VPN client from elsewhere. See also the [corresponding How-to Card](https://howto.lcsb.uni.lu/?access:vpn-cerbere-access).|
+|[uniluxembourg.sharepoint.com](https://uniluxembourg.sharepoint.com/) / [intranet.lcsb.uni.lu](https://uniluxembourg.sharepoint.com/sites/lcsb/lcsb_internal/SitePages/default.aspx)|The internal platform of the University / the LCSB **Please note:** When outside the university network, you'll need to log in with your university credentials.
 |[service.uni.lu](https://service.uni.lu/sp)|Here you find service and support from the university. You can create tickets on all regulatory and legal issues as well as on IT-related topics, e.g. to get access to specific folders and software.|
 |[lums.uni.lu](https://lums.uni.lu)|The LUMS (LCSB User Management System) allows you to get access to internal resources such as software provided and/or hosted by the LCSB. **Please note:** You need to request an additional account to be able to log in as your usual UNI.LU-credentials will **not do the job.** The LUMS-accounts can also be created for external researchers and collaborators.|
 |[howto.lcsb.uni.lu](https://howto.lcsb.uni.lu/)|This is where the How-to Cards are deposited and constantly updated. You can find answers on administrative as well as on lab-related procedures here. For complex instructions, a step-by-step tutorial with corresponding screenshots or examples is provided. We encourage you to bookmark this page as many answers to your questions might be covered by a card. If you have any suggestions for improvements on existing or additional How-to Cards, just contact the R3 department.|
-|[owncloud.lcsb.uni.lu](https://owncloud.lcsb.uni.lu/)|LCSB ownCloud is a private cloud storage service for the use of LCSB staff and collaborators. It is suitable for exchanging small-sized files (up to 1-2 gigabyte, all SSL encrypted). You need a [LUMS account](https://howto.lcsb.uni.lu/?access:lums-passwords) for using this platform. The LUMS accounts can also be provided to external collaboration partners and can be requested at the [Service Portal](https://service.uni.lu/sp). For more information see also the [User’s Guide for ownCloud](https://howto.lcsb.uni.lu/?exchange-channels:owncloud).|
+|[owncloud.lcsb.uni.lu](https://owncloud.lcsb.uni.lu/)|LCSB ownCloud is a private cloud storage service for the use of LCSB staff and collaborators. It is suitable for exchanging small-sized files (up to 1-2 gigabyte, all SSL encrypted). You need a [LUMS account]({{ '/?access:lums-passwords' | relative_url }}) for using this platform. The LUMS accounts can also be provided to external collaboration partners and can be requested at the [Service Portal](https://service.uni.lu/sp). For more information see also the [User’s Guide for ownCloud]({{ '/?exchange-channels:owncloud' | relative_url }}).|
 |[daisy.lcsb.uni.lu](https://daisy.lcsb.uni.lu/)|The DAta Information SYstem (DAISY) is a comprehensive tool to manage your research data in a GDPR-compliant manner. You can create projects & datasets and share them with your collaboration partners. For more information and detailed description on DAISY, please refer to the [DAISY documentation](https://elixir.pages.uni.lu/daisy-doc/).|
-|[gitlab.lcsb.uni.lu](https://gitlab.lcsb.uni.lu/)|A developer’s platform operated by the R3-team where you can contribute to publish and develop public protocols/procedures, etc.  For instance, these How-to-cards can be created there. So also the corresponding card on [how to contribute](https://howto.lcsb.uni.lu/?contribute:web-ide).|
+|[gitlab.lcsb.uni.lu](https://gitlab.lcsb.uni.lu/)|A developer’s platform operated by the R3-team where you can contribute to publish and develop public protocols/procedures, etc.  For instance, these How-to-cards can be created there. So also the corresponding card on [how to contribute]({{ '/?contribute:web-ide' | relative_url }}).|
 |[owa.uni.lu](https://owa.uni.lu/)|The Outlook Web Application to access your mail account via any web browser. Login with you UNI.LU-credentials.|
 |[fiori.uni.lu](https://fiori.uni.lu/fiori/)|Upon login with your UNI.LU-credentials, this site provides you information on your employee profile. You can submit leave requests via this portal and also view your payslips.|
-|[archibus.uni.lux](https://archibus.uni.lux)|Booking a room in BT2 ground floor, Room 212 in BT1 and meeting rooms in other university buildings. **Please note:** This site can only be accessed when you are logged into the university network, either in your office or via a VPN client from elsewhere. See also the [corresponding How-to Card](https://howto.lcsb.uni.lu/?access:vpn-cerbere-access). Login with your staff/student credentials.|
-|[llcreservation.uni.lu](http://llcreservation.uni.lu)|Booking a room in the Luxembourg Learning Centre at the University Campus in Belval. Login with your staff/student credentials.|
+|[archibus.uni.lux](https://archibus.uni.lux)|Booking a room in BT2 ground floor, Room 212 in BT1 and meeting rooms in other university buildings. **Please note:** This site can only be accessed when you are logged into the university network, either in your office or via a VPN client from elsewhere. See also the [corresponding How-to Card]({{ '/?access:vpn-access' | relative_url }}). Login with your staff/student credentials.|
+|[affluences.com](https://affluences.com/universite-du-luxembourg-1/luxembourg-learning-centre/reservation)|Booking a room in the **Luxembourg Learning Centre** at the University Campus in Belval is done through affluences.com - Login with your staff/student credentials.|

external/integrity/dmp/dmp.md

+---
+layout: page
+permalink: /external/integrity/dmp/
+shortcut: integrity:dmp
+redirect_from:
+  - /cards/integrity:dmp
+  - /external/cards/integrity:dmp
+  - /integrity/dmp
+  - /external/external/integrity/dmp/
+---
+
+# Data Management Plan
+
+<img src="img/lcsb_rd-lifecycle.png" width=500>
+
+Data management planing is a process of defining and documenting strategy for management of research data in each step of research data lifecycle throughout the research project. The main goal of the process is to create concise and complete document (Data Management Plan - DMP) which helps all involved stakeholders to avoid unexpected and unnecessary problems before, during and after the project. Data management plan also contributes to adoption of best data management practices and as such it is increasingly required by funders along the project proposal.
+
+## Best practices when writing DMP
+
+* **Do not copy paste** - Blindly accepting existing content can be error prone and does not help the research team to review the project specific settings.
+* **Update it regularly** - As the research project progresses, new aspects (infrastructure, partners, data uses, ...) should be reflected in the DMP to allow effective adoption of changes.
+* **Start in time** - Data management requirements have implications on all downstream processes including negotiations of legal documents and setup of necessary infrastructure. Therefore, the DMP should be revised as soon as possible after the funding is granted.
+* **Get help** - Collaboration with institutional support services is crucial for correctness and completeness of the planning.
+* **Share it** - Communicating data management plan in timely manner to all members of the project, partners and other involved stakeholders contributes to transparency of the planned operations.
+
+## Data management planning at LCSB
+
+There are several options for data management planning:
+
+|Name | Description | Pros | Cons | Choose when: |
+| ----------- | ----------- | ---- | ---- | --- |
+| [DSW Elixir Luxembourg](https://elixir-lu.ds-wizard.org/) | Instance of [Data Stewardship Wizard](https://ds-wizard.org/) tool facilitating detailed data management planning with overall awareness raising. | Includes guidance on questions, external references<br> Complex questionnaires with branching logic<br>  Collaborative editing.<br>  Comments and TODOs<br>  Multiple sharing options <br> Supports university credentials (via LS Login) <br> Horizon Europe and Science Europe export templates (FNR template in preparations) <br> Versioning and several multiple format export| Require user to familiarize themselves with the tool environment <br> Questionnaire can seem exhaustive | Choose when you want to responsibly perform and manage very detailed and structured data management plan while raising awareness of all aspects of research data management life cycle. |
+| [DMPOnline](https://unilu.dmponline-mt.dcc.ac.uk) provided by University of Luxembourg <br> [DMPRoadmap](https://dmponline.elixir-luxembourg.org/) provided by Elixir Luxembourg | Instances of identical tools for simple and effective tool for data management plan document compilation. | Includes guidance on questions. <br> Supports versioning and multiple format export.<br>  Comments and sharing. <br> Supports FNR export template. ​| Questions are rather general as they follow template provided by funder. | Choose when you are experienced in data management planning and you need a simpler tool allowing fast compilation of the document. |
+| Document provided by funder | Funders requiring data management plan usually provide document template. See example of templates for [FNR](https://storage.fnr.lu/index.php/s/urQOCMeKlgXexZF) or [Horizon Europe](https://enspire.science/wp-content/uploads/2021/09/Horizon-Europe-Data-Management-Plan-Template.pdf). | Format of the document is matching the funder requirements | Questions are rather general. <br>  Limited guidance. | Choose if you are performing the planning alone and your project is not complex from data management point of view. |
+
+ ([LCSB data stewards](mailto:lcsb-datastewards@uni.lu)) provide full support on data management planing including the tools, trainings and DMP reviews.
+
+## References
+
+Pergl, R., Hooft, R., Suchánek, M., Knaisl, V., & Slifka, J. (2019). "Data Stewardship Wizard": A Tool Bringing Together Researchers, Data Stewards, and Data Experts around Data Management Planning. Data Science Journal, 18. [https://doi.org/10.5334/dsj-2019-059])https://doi.org/10.5334/dsj-2019-059)
+
+ELIXIR (2021) Research Data Management Kit. A deliverable from the EU-funded ELIXIR-CONVERGE project (grant agreement 871075). URL: https://rdmkit.elixir-europe.org

external/integrity/encryption/cloud/cloud.md

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-layout: page
-permalink: /external/integrity/encryption/cloud/
-shortcut: integrity:encryption:cloud
-redirect_from:
-  - /cards/integrity:encryption:cloud
-  - /external/cards/integrity:encryption:cloud
-  - /integrity/encryption/cloud
-  - /external/external/integrity/encryption/cloud/
----
-
-# Data upload to cloud
-
-Data encryption and hash-check for uploading to UL-LCSB onedrive or owncloud from Windows.
-
-| Requirements | Restrictions |
-| ------ | ------ |
-| Windows 8 or newer (recommended Windows 10) | Recommended for data size less than 100 GB |
-| RAM 2GB (recommended 4GB) | If transfer through Aspera is not possible |
-| Enough free disc space (data will be duplicated for encryption) | Larger data will take more time to encrypt |
-| Administrative rights to install software |  |
-| Web browser (Firefox, Edge or Chrome) |  |
-
-## Install `7zip` for encryption
-
-Download and install `7zip` from [here](https://www.7-zip.org/)
-
-## Install tool for MD5 checksum calculation
-
-1. Search Microsoft Store for `Simple Checksum Calculator` or go to this [link](https://www.microsoft.com/en-us/p/simple-checksum-calculator/9nblggh5l6t9?activetab=pivot:overviewtab)
-2. Install `Simple Checksum Calculator`
-
-
-## Encrypt your data with `7zip`
-
-1. Right click on the folder to encrypt > 7zip > Add to archive
-2. Select following values:
-   - Archive format: `zip`
-   - Compression: `store`
-   - Check `Show Password` box
-   - Encryption: `AES256`
-3. Enter a password and make a copy of the encryption password :key:
-4. Click save to save the encrypted zip file
-
-![](media/7zip-encryption-windows.mp4?width=400)
-
-## Calculate the MD5 checksum with `Simple Checksum Calculator`
-
-1. Open `Simple Checksum Calculator` from the start-menu
-2. Select `File` tab from the top menu
-3. Click on the file icon box in the left panel and load the encrypted zip file
-4. Make a copy of the MD5 checksum key :label:
-
-![](media/Get_MD5_checksum_windows.mp4)
-
-## Data upload
-
-1. Open the `OneDrive` or `ownCloud` URL link that you have received from UL-LCSB contact
-2. Upload the encrypted zip file
-3. After the upload completion, open [UNILU privatebin](https://hpc.uni.lu/privatebin/)
-4. Paste the **encryption password :key:** and **MD5 checksum :label:** in the Editor box and press send
-5. Copy the privatebin URL and send it your UL-LCSB contact through email
\ No newline at end of file

external/integrity/encryption/disk/encryption_disk.md

@@ -9,7 +9,7 @@ redirect_from:
   - /external/external/integrity/encryption/disk/
 ---
 # Encrypting the Startup Disk for Your Laptop/Desktop
-Encrypting an entire hard disk is an effective protective measure against computer theft and loss. In this lab card we provide instructions for switching on disk encryption on macOS and Windows platforms.
+Encrypting an entire hard disk is an effective protective measure against computer theft and loss. This How-to card provides instructions for switching on disk encryption on macOS and Windows platforms.
 
 **IMPORTANT NOTICE:** One important requirement of using Encryption is that you must  manage your Encryption Passwords/Keys. Failing to do so will mean **loosing your data indefinitely**. In this [link]({{ '/?access:passwords' | relative_url }}) we list  tools that can be used for password management. **Please make sure you have arrangements for password management before starting the encryption of data**.
 
@@ -45,4 +45,5 @@ The steps to enable **BitLocker** are as follows:
 
 In case you want to change your start-up PIN, you can do this by   going to **Control Panel/BitLocker Drive Encryption** and then selecting **Manage BitLocker**, and then from the available options select **Change PIN**.
 
+For further information on full disk encryption, please follow the user guide [article KB0011673 in ServiceNow](https://service.uni.lu/sp?id=kb_article_view&sysparm_article=KB0011673). 
 

external/integrity/encryption/file/encryption_file.md

@@ -9,9 +9,9 @@ redirect_from:
   - /external/external/integrity/encryption/file/
 ---
 # Encrypting Files and Folders
-Encryption is an effective measure to protect sensitive data. In this lab card we provide instructions for file/folder encryption on platforms commonly used by LCSB staff.
+Encryption is an effective measure to protect sensitive data. This How-to card provides instructions for file and folder encryption on platforms commonly used by LCSB staff.
 
-**IMPORTANT NOTICE:** One important requirement of using Encryption is that you must  manage your Encryption Passwords/Keys. Failing to do so will mean **loosing your data indefinitely**. In this [link]({{ '/?access:passwords' | relative_url }}) we list  tools that can be used for password management. **Please make sure you have arrangements for password management before starting the encryption of data**.
+**IMPORTANT NOTICE:** One important requirement of using Encryption is that you must  manage your Encryption Passwords/Keys. Failing to do so will mean **losing your data indefinitely**. The [Managing your passwords card]({{ '/?access:passwords' | relative_url }}) lists the tools that can be used for password management. **Please make sure you have arrangements for password management before starting the encryption of data**.
 
 ## macOS
 The built-in mechanism for file-level encryption on a Mac is  Encrypted Disk Images (*.dmg* files). In order to create a disk image:
@@ -83,20 +83,15 @@ In order to use turn on EFS for a folder:
 
 ## Cloud Platforms
 
-As per LCSB Policy, you should not store sensitive human data on commercial cloud services (e.g. Google Drive, Dropbox). However, there may be situations where commercial clouds are used:
+As per LCSB Policy, you should NOT store sensitive human data on commercial cloud services (e.g. Google Drive, Dropbox). However, there may be situations where commercial clouds are used:
 
-- There is a project/consortium level agreement to use external cloud storage,
-- You're working with sensitive data, and need to temporarily co-access it with research collaborators,
+- There is a project/consortium level agreement to use external cloud storage.
+- You're working with sensitive data, and need to temporarily co-access it with research collaborators.
 - You're working with non-sensitive data and using the cloud as a backup target.
 
 In such cases, you may use the following desktop tools to encrypt cloud folders.
 
-- [boxcryptor](https://www.boxcryptor.com/en/) (Paid). If you're holding sensitive LCSB research data  on commercial cloud (case 2 above), you must use Boxcryptor. Contact the LCSB IT  team to request a license.
-    - [Installation/Mac](http://bit.ly/BXC-MAC_INSTALLATION)
-    - [Installation/Windows](http://bit.ly/BXC-WINDOWS_INSTALLATION)
-    - [Sharing Folders](http://bit.ly/BXC-FILE_SHARING)
-    - [Encrypt Folder](http://bit.ly/BXC-FILE_ENCRYPTION)
-    - [Decrypt Folder](http://bit.ly/BXC-FILE_DECRYPTION)
+- [Cryptomator](https://cryptomator.org/). If you're holding sensitive LCSB research data on commercial cloud (case 2 above), you must use Cryptomator. Request a license via ServiceNow and visit the dedicated [How-to card on Cryptomator]({{ '?exchange-channels:cryptomator' | relative_url }}) for further information.
 
 - [Cyberduck](https://cyberduck.io/cryptomator/) (Free).
 
@@ -105,4 +100,4 @@ In such cases, you may use the following desktop tools to encrypt cloud folders.
 
 The Uni-LU HPC Team is planning to install [EncFS](https://en.wikipedia.org/wiki/EncFS) on the HPC clusters. EncFS allows for the creation of an encrypted volume (similar to a folder). EncFS provides transparent encryption, once you mount the encrypted volume, anything that goes into the volume will automatically be encrypted. Also, whenever you try to view or process a file in a mounted EncFS volume, it will be decrypted for you (behind the scenes) automatically.
 
-We will provide instructions for EncFS once it becomes available .
+The instructions for EncFS will be provided once it becomes available.

external/integrity/sanitisation/sanitisation.md

@@ -11,7 +11,7 @@ redirect_from:
 
 # Sanitising Data Files
 
-In this lab card we list software  that can be used to permanently delete **individual files** from storage. If you need to sanitise an entire storage device (e.g. laptop, external hard drive), this will be done for you by University IT Services, please create a ticket on [ServiceNow](https://service.uni.lu/) (using item **Catalogue/IT/Information Security Services** ).
+This How-to card lists software that can be used to permanently delete **individual files** from storage. If you need to sanitise an entire storage device (e.g. laptop, external hard drive), this will be done for you by University IT Services, please create a ticket on [ServiceNow](https://service.uni.lu/) (using item **Catalogue/IT/Information Security Services** ).
 
 Table 2 lists software that can be used on different platforms for permanent file removal.