From 978a3f08b2ab796f2c56f456d461db601197e13c Mon Sep 17 00:00:00 2001
From: Steffen Neumann <sneumann(at)ipb-halle.de>
Date: Thu, 8 May 2014 16:09:59 +0200
Subject: [PATCH] renamed argument name in function call

---
 R/msmsRawExtensions.r | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/R/msmsRawExtensions.r b/R/msmsRawExtensions.r
index 24719d8..bee6035 100644
--- a/R/msmsRawExtensions.r
+++ b/R/msmsRawExtensions.r
@@ -207,7 +207,7 @@ msmsRead.ticms2 <- function(w, filetable = NULL, files = NULL, cpdids = NULL,
   
   ##Peaklist-readmethod 
   if(readMethod == "peaklist"){
-    w <- createSpecsFromPeaklists(w, cpdids, dirnames=w@files, mode=mode)
+    w <- createSpecsFromPeaklists(w, cpdids, filenames=w@files, mode=mode)
     names(w@specs) <- basename(as.character(w@files))
     return(w)
   }
@@ -308,4 +308,4 @@ findMsMsHR.ticms2.file <- function(fileName, cpdID, mode="pH",confirmMode =0, us
       rtMargin, deprofile)
   mzR::close(msRaw)
   return(ret)
-}
\ No newline at end of file
+}
-- 
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