From d4fc99118cbbd4d5567dcb70c392b5d23380b6ea Mon Sep 17 00:00:00 2001
From: Michele Stravs <stravsmi@eawag.ch>
Date: Wed, 9 Dec 2015 16:14:24 +0100
Subject: [PATCH] fixed bug (where did this come from??)

---
 R/leMsmsRaw.R | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/R/leMsmsRaw.R b/R/leMsmsRaw.R
index a94ca9a..41a75fb 100644
--- a/R/leMsmsRaw.R
+++ b/R/leMsmsRaw.R
@@ -580,7 +580,7 @@ findEIC <- function(msRaw, mz, limit = NULL, rtLimit = NA, headerCache = NULL, f
 	if(is.null(peaksCache))
 		pks <- mzR::peaks(msRaw, headerMS1$seqNum)
 	else
-		pks <- peaksCache[headerData$rowNum]
+		pks <- peaksCache[headerMS1$rowNum]
 		
 	# Sum intensities in the given mass window for each scan
 	if(is.null(floatingRecalibration))
-- 
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