figures:
  rt_max: .na.real
  rt_min: .na.real
  ext: pdf
  logaxes: []
debug: no
prescreen:
  s2n: 3
  ret_time_shift_tol: 0.5 min
  ms2_int_thresh: 2500
  ms1_int_thresh: 100000
compounds:
  lists: C:/Users/test/Documents/R_projects/200_PFAS/negative_Hydrogen/December2020/deduped_CmpdList_Neg_Hy_noIons.csv
  sets: C:/Users/test/Documents/R_projects/200_PFAS/negative_Hydrogen/December2020/setID_neg.csv
  data: ''
project: C:/Users/test/Documents/R_projects/200_PFAS/negative_Hydrogen/December2020
tolerance:
  rt: 0.5 min
  ms1 coarse: 0.5 Da
  ms1 fine: 5 ppm
  eic: 0.001 Da
extract:
  missing_precursor_info: do_nothing
data: C:/Users/test/Documents/R_projects/200_PFAS/negative_Hydrogen/December2020/data-files.csv
summary table:
  order:
  - -qa_pass
  - -ms1_int
  - -mz
report:
  author: ''
  title: ''