Explore projects

Analysis workflows for the Leptospirillum ferriphilum omics data

PINK1 shows LRRK2, Parkin, and SNCA as part of the Parkinson’s network.

This repository contains the code for statistical analyses performed in Chapter 3 of my thesis "Cross-sectional and longitudinal profiling of PD transcriptomics and metabolomics". The project consists on whole blood transcriptomics and blood plasma metabolomics cross-sectional and longitudinal profiling of Parkinson's disease patients and controls from the PPMI cohort and the LuxPARK cohort respectively, to identify differential molecular and higher-level functional features in PD.

derived from the work done here https://github.com/snakemake-workflows/chipseq

Repository for all slides related to R3 courses.

Persistence of birth mode-dependent effects on gut microbiome composition, immune system stimulation and antimicrobial resistance during the first year of life

Integrated Network approach for Cellular Transitions through SIgnalling MOlecules

16S analyses for MCI groups in NCER-PD.

Fork from imp3 repo to use for NOMIS etc.

Scripts for the analysis of metagenomic data from the first week of life.