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Network Analyses - SpiecEasi The Rscripts and Snakefile herein can be used to run SpiecEasi for generating networks from taxonomic counts Dependencies snakemake >= 5.3.0 References (SpiecEasi)[https://github.com/zdk123/SpiecEasi]

Repository for scripts used in the analyses for the publication "Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance"

Repository for all slides related to R3 courses.

Classifier scripts to identify prokaryote and eukaryotic contigs

Scripts, launchers and snakefiles for analysing AMR, MGEs and transmission across mice with and without antibiotic treatment

Basic practice repository for git trainings

Repository for building the official website of the R3 lab.

University website.

Code related to Talavera Andujar et al DOI: 10.26434/chemrxiv-2023-6j2gm