Explore projects
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BDS / GeneDER / GeneDER_core
MIT LicenseThis repository contains the scripts that have been developed in the course of the GeneDER project (Biomedical Data Science group - Enrico Glaab Lab).
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ESB / ONT_pilot_gitlab
GNU General Public License v3.0 or laterMethod testing and analyses of Oxford Nanopore Technology (ONT) sequencing runs Data obtained by sequencing "generous donor B" across several runs Original data prepared by Rashi (post-sequencing) Initial analyses performed by CCLUpdated -
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Elisa Gomezdelope / ML_UPDRSIII_metab_transc
MIT LicenseThis repository contains the code for ML analyses performed in Chapter 5 of my PhD thesis "Interpretable machine learning on omics data for the study of UPDRS III prognosis". The project consists on predicting the Unified Parkinson’s Disease Rating Scale Part III (UPDRS III) motor scores (mild/severe when classification) from whole blood transcriptomics and blood plasma metabolomics using measurements from the baseline clinical visit, and temporal or dynamic features engineered from a short temporal series of 4 and 3 timepoints, respectively, from the PPMI cohort and the LuxPARK cohort, aiming at identifying molecular and higher-level functional fingerprints linked specifically to the motor symptoms in PD.
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This repository contains the code for statistical analyses performed in Chapter 3 of my thesis "Cross-sectional and longitudinal profiling of PD transcriptomics and metabolomics". The project consists on whole blood transcriptomics and blood plasma metabolomics cross-sectional and longitudinal profiling of Parkinson's disease patients and controls from the PPMI cohort and the LuxPARK cohort respectively, to identify differential molecular and higher-level functional features in PD.
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Computational modelling and simulation / C19DM-Neo4j database
GNU General Public License v3.0 or laterUpdated -
Kaan Cimir / external
Creative Commons Attribution Share Alike 4.0 InternationalExternally visible Howto Cards (preview at https://lcsb.pages.uni.lu/howto/external )
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Janine Schulz / basic-practice-pages
MIT LicenseBasic practice repository for git trainings
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Environmental Cheminformatics / PD cheminformatics pipeline
Artistic License 2.0Updated -
Matthieu Gobin / r3-pages
Creative Commons Zero v1.0 UniversalRepository for building the official website of the R3 lab.
Here is the presence on the university website.
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CBG / INCanTeSIMO
GNU General Public License v3.0 onlyIntegrated Network approach for Cellular Transitions through SIgnalling MOlecules
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Computational modelling and simulation / GeneRegulationAnalysis
GNU Affero General Public License v3.0Gene regulation inference of COVID-19
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