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COVID-19 / models
GNU General Public License v3.0 onlyComputational models of different aspects of COVID-19
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Elisa Gomezdelope / ML_UPDRSIII_metab_transc
MIT LicenseThis repository contains the code for ML analyses performed in Chapter 5 of my PhD thesis "Interpretable machine learning on omics data for the study of UPDRS III prognosis". The project consists on predicting the Unified Parkinson’s Disease Rating Scale Part III (UPDRS III) motor scores (mild/severe when classification) from whole blood transcriptomics and blood plasma metabolomics using measurements from the baseline clinical visit, and temporal or dynamic features engineered from a short temporal series of 4 and 3 timepoints, respectively, from the PPMI cohort and the LuxPARK cohort, aiming at identifying molecular and higher-level functional fingerprints linked specifically to the motor symptoms in PD.
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Elisa Gomezdelope / ML_PD_metab_transc
MIT LicenseThis repository contains the code for ML analyses performed in Chapter 4 of my PhD thesis "Interpretable Machine Learning on omics data for biomarker discovery in Parkinson's disease". The project consists on performing Parkinson's disease (PD) case-control classification from blood plasma metabolomics measurements at the baseline clinical visit from the LuxPARK cohort, and from whole blood transcriptomics data at baseline as well as dynamic features engineered from a short temporal series of 4 timepoints from the PPMI cohort. The study involves evaluation of different feature selection strategies, The goal was to build and test a collection of ML models and, most interestingly, identify molecular and higher-level functional representations associated with PD diagnosis.
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BDS / Ml Dyskinesia
MIT LicenseUpdated -
Guadalupe Garcia / Mitochondrial morphology
MIT LicenseUpdated -
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Scripts, launchers and snakefiles for analysing AMR, MGEs and transmission across mice with and without antibiotic treatmentUpdated
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This project hosts the JSON schemas used for representing the metadata of submissions to the ELIXIR translational data repository. It also provides validation utility methods.
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This project hosts the JSON schemas used for representing the metadata of submissions to the ELIXIR translational data repository. It also provides validation utility methods.
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This project hosts the JSON schemas used for representing the metadata of submissions to the ELIXIR translational data repository. It also provides validation utility methods.
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This project hosts the JSON schemas used for representing the metadata of submissions to the ELIXIR translational data repository. It also provides validation utility methods.
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R3 / legacy / megahit
GNU General Public License v3.0 onlyMirror of https://github.com/voutcn/megahit.git -16/07/2015-
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R3 / outreach / templates / presentations / markdown
Creative Commons Zero v1.0 UniversalUpdated -
Nene Barry / markdown
Creative Commons Zero v1.0 UniversalUpdated -
Piotr Gawron / mail-sender
MIT LicenseSend personalized emails to group of users
archived 0Updated -
genomeanalysis / NCER / LuxPark_genetic_landscape
Apache License 2.0Updated -
genomeanalysis / LuxPARK
Apache License 2.0Updated -
A python package to spider-like checking accessibility of HTML links
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