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An exploration on gene expression data was carried out on single-cell RNAseq analyses of bronchoalveolar lavages from nine COVID-19 patients, three moderate cases, severe case and critical cases, comparing with healthy subjects.

Healthy Brain Ageing Project Wiki - Biocore, LCSB

Fork from imp3 repo to use for NOMIS etc.

All scripts used for AMR and MGE analysis of the LAO dataset

A computational method to identify signalling perturbations targeting specific sets of transcription factors for cellular conversion

ELIXIR Luxembourg's GA4GH Beacon API implementation in Python

Gene regulation inference of COVID-19

This project hosts the JSON schemas used for representing the metadata of submissions to the ELIXIR translational data repository. It also provides validation utility methods.

PhysiBoSS-COVID: the Boolean modelling of COVID-19 signalling pathways in a multicellular simulation framework

Scripts, launchers and snakefiles for analysing AMR, MGEs and transmission across mice with and without antibiotic treatment

Basic practice repository for git trainings

Basic practice repository for git trainings