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LAO time series analyses

The back-end component of Fractalis.

Code for generation of Recon3 model(s)

Static site that list some projects in the biocore. Use Jekyll.

The front-end component of Fractalis.

Scripts for the analysis of metagenomic data from the first week of life.

Static site that list some projects in the biocore. Use Jekyll.

Workflow for the COSMIC study samples. Based on IMP assemblies and automatic single sample binning, resulting bins are linked in different samples related to 1 patient (different time-points of fecal samples and samples from the mother).

This is a pipeline to re-assemble the LAO isolate genomes. I could be potentially modified and applied to any other genome sequencing project.

Analysis workflows for the Leptospirillum ferriphilum omics data

scripts for ZOTERO .bib generation

MINERVA (Molecular Interaction NEtwoRk VisuAlization) platform is a standalone webserver for visualization, exploration and management of molecular networks encoded in SBGN-compliant format.