| ... | ... | @@ -13,7 +13,6 @@ The following files are generated by PathoFact itself: |
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- no header, one gene ID per line
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- contig and gene IDs should be the same as in the FASTA files
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The input file for each sample should be located in the same directory.
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For each sample, the corresponding input files should have the same basename, e.g. `SAMPLE_A.fna` for sample `SAMPLE_A`.
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The input file for all samples should be located in the same directory.
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**NOTE**: For preprocessing and assembly of metagenomic reads we would suggest using IMP (https://imp.pages.uni.lu/web/) |
