[Diff since v0.6.8](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.6.8...v0.7.0)

**Merged pull requests:**
- CompatHelper: bump compat for "CSV" to "0.10" (#202) (@github-actions[bot])
- use distributed processing from DiDa (#203) (@exaexa)
- Develop→master merge for v0.7.0 (#204) (@exaexa)

[Diff since v0.6.7](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.6.7...v0.6.8)

**Closed issues:**
- add CITATION.cff file (#198)

**Merged pull requests:**
- update compathelper action (#197) (@exaexa)
- Clean up a bit, add container building (#199) (@exaexa)
- Add citation info (#200) (@exaexa)
- develop → master merge for 0.6.8 (#201) (@exaexa)

[Diff since v0.6.6](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.6.6...v0.6.7)

**Closed issues:**
- Bump version v0.6.6 (#191)

**Merged pull requests:**
- update the CI for the new gitlab (#193) (@exaexa)
- update ci, attempt 2 (#194) (@exaexa)
- regular merge of develop (#195) (@exaexa)
- Bump version to 0.6.7 (#196) (@exaexa)

[Diff since v0.6.5](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.6.5...v0.6.6)

**Merged pull requests:**
- remove explicit login to registry (#189) (@laurentheirendt)
- Develop (#190) (@laurentheirendt)

[Diff since v0.6.4](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.6.4...v0.6.5)

**Closed issues:**
- Bump version v0.6.4 (#180)
- Accessing the intermediate SOM states during the training (#182)

**Merged pull requests:**
- change trigger action for docker (#181) (@laurentheirendt)
- support user-specified callbacks after each SOM training epoch (#183) (@exaexa)
- Fix the error accidentally introduced in PR#183  (#184) (@exaexa)
- Develop (#185) (@laurentheirendt)
- CompatHelper: bump compat for "DataFrames" to "1.0" (#186) (@github-actions[bot])
- CompatHelper: bump compat for "Distributions" to "0.25" (#187) (@github-actions[bot])

[Diff since v0.6.3](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.6.3...v0.6.4)

**Closed issues:**
- remove deprecation warnings (#165)
- Bump version v0.6.3 (#175)

**Merged pull requests:**
- slight update of workflow scripts (#176) (@exaexa)
- remove deprecated DataFrame usage (#177) (@exaexa)
- feature: Add docker creation (#178) (@laurentheirendt)
- Develop (#179) (@laurentheirendt)

## GigaSOM v0.6.3

[Diff since v0.6.2](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.6.2...v0.6.3)


**Closed issues:**
- clim kwarg in expressionPalette or expressionColors (#171)

**Merged pull requests:**
- only run nightly on develop (#169) (@laurentheirendt)
- Regular merge of develop (#170) (@laurentheirendt)
- fix stable version of docs (#172) (@laurentheirendt)
- remove windows latest on ci branch (#173) (@laurentheirendt)
- bump version (#174) (@laurentheirendt)

## GigaSOM v0.6.2

[Diff since v0.6.1](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.6.1...v0.6.2)


**Closed issues:**
- add wrapper for sub-clustering (#107)
- Bump version v0.6.1 (#156)
- Adding CSV file import (#159)

**Merged pull requests:**
- CompatHelper: bump compat for "Distributions" to "0.24" (#157) (@github-actions[bot])
- CompatHelper: bump compat for "Distances" to "0.10" (#158) (@github-actions[bot])
- CSV file input helpers (#160) (@exaexa)
- CompatHelper: bump compat for "CSV" to "0.8" (#161) (@github-actions[bot])
- Regular merge of develop (#163) (@laurentheirendt)
- remove runtests script and add gitlab ci (#164) (@laurentheirendt)
- new nodes on gitlab CI (#166) (@laurentheirendt)

## GigaSOM v0.6.1

[Diff since v0.6.0](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.6.0...v0.6.1)


**Closed issues:**
- add RRID to doc (#146)
- Bump version v0.6.0 (#150)

**Merged pull requests:**
- Fix the XLSX use in docs (#153) (@exaexa)
- add RRID to the README (#154) (@exaexa)
- Regular merge of develop (#155) (@laurentheirendt)

## GigaSOM v0.6.0

[Diff since v0.5.1](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.5.1...v0.6.0)


**Closed issues:**
- possible test failure in upcoming Julia version 1.5  (#132)
- Bump version v0.5.1 (#143)
- fix seed for random initialization of the SOM (#144)
- Issue with parallel computation (#145)

**Merged pull requests:**
- use StableRNGs for initialization (#147) (@exaexa)
- add minor version in toml (#148) (@laurentheirendt)
- Regular merge of develop (#149) (@laurentheirendt)
- CompatHelper: add new compat entry for "StableRNGs" at version "1.0" (#151) (@github-actions[bot])
- Regular merge of develop (#152) (@laurentheirendt)

## GigaSOM v0.5.1

[Diff since v0.5.0](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.5.0...v0.5.1)


**Closed issues:**
- Bump version v0.5.0 (#138)

**Merged pull requests:**
- CompatHelper: bump compat for "XLSX" to "0.7" (#139) (@github-actions[bot])
- CompatHelper: bump compat for "CSV" to "0.7" (#140) (@github-actions[bot])
- bump version (#141) (@laurentheirendt)
- Regular merge of develop (#142) (@laurentheirendt)

## GigaSOM v0.5.0

[Diff since v0.4.2](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.4.2...v0.5.0)


**Closed issues:**
- add sample_id to distributed file splitting (#84)
- implement consensus clustering in pure Julia (#85)
- Bump version v0.4.2 (#128)

**Merged pull requests:**
- Implement easy computation of per-file stats (#129) (@exaexa)
- implement load-time columns selection (#130) (@exaexa)
- apply JuliaFormatter (#131) (@exaexa)
- CompatHelper: bump compat for "DataFrames" to "0.21" (#133) (@github-actions[bot])
- CompatHelper: bump compat for "Distances" to "0.9" (#134) (@github-actions[bot])
- Regular merge of develop (#135) (@laurentheirendt)
- bump version (#136) (@laurentheirendt)
- Regular merge of develop (#137) (@laurentheirendt)

## GigaSOM v0.4.2

[Diff since v0.4.1](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.4.1...v0.4.2)



**Merged pull requests:**
- add release event to yml (#124) (@laurentheirendt)
- add infer_eltypes to tutorial (#125) (@laurentheirendt)
- bump version (#126) (@laurentheirendt)
- Regular merge of develop (#127) (@laurentheirendt)

## GigaSOM v0.4.1

[Diff since v0.4.0](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.4.0...v0.4.1)


**Closed issues:**
- Bump version v0.4.0 (#119)

**Merged pull requests:**
- Use Github Actions to deploy docs (#120) (@laurentheirendt)
- Add evolution gif and minor changes (#121) (@laurentheirendt)
- Regular merge of develop (#122) (@laurentheirendt)

## GigaSOM v0.4.0

[Diff since v0.3.2](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.3.2...v0.4.0)


**Closed issues:**
- Bump version v0.3.2 (#111)

**Merged pull requests:**
- check length of FCS keyword names before trying to interpret them (#112) (@exaexa)
- README facelift (#113) (@exaexa)
- Add code of conduct (#114) (@laurentheirendt)
- Add contributing guide and pr/issue templates (#115) (@laurentheirendt)
- Minor changes readme (#116) (@laurentheirendt)
- Regular merge of develop (#117) (@laurentheirendt)
- Regular merge of develop (#118) (@laurentheirendt)

## GigaSOM v0.3.2

[Diff since v0.3.1](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.3.1...v0.3.2)


**Closed issues:**
- Bump version v0.3.1 (#105)

**Merged pull requests:**
- CompatHelper: bump compat for "Distributions" to "0.23" (#106) (@github-actions[bot])
- CompatHelper: bump compat for "CSV" to "0.6" (#108) (@github-actions[bot])
- Regular merge of develop (#109) (@laurentheirendt)
- bump version (#110) (@laurentheirendt)

## GigaSOM v0.3.1

[Diff since v0.3.0](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.3.0...v0.3.1)


**Closed issues:**
- Bump version v0.3.0 (#101)

**Merged pull requests:**
- remove devbranch (#102) (@laurentheirendt)
- set dev branch to env var (#103) (@laurentheirendt)
- Regular merge of develop (#104) (@laurentheirendt)

## GigaSOM v0.3.0

[Diff since v0.2.2](https://github.com/LCSB-BioCore/GigaSOM.jl/compare/v0.2.2...v0.3.0)


**Closed issues:**
- Update documentation (#66)
- Bump version v0.2.2 (#79)

**Merged pull requests:**
- Parallel I/O (#81) (@laurentheirendt)
- Parallel io additions (#83) (@oHunewald)
- Update EmbedSOM implementation to that of R package v2.0 (#86) (@exaexa)
- Fix performance regression (using DataFrames in low-level code) (#87) (@exaexa)
- Install TagBot as a GitHub Action (#88) (@JuliaTagBot)
- add compat helper (#89) (@laurentheirendt)
- generalize the distributed operations (#90) (@exaexa)
- CompatHelper: bump compat for "Distributions" to "0.22" (#91) (@github-actions[bot])
- CompatHelper: add new compat entry for "DataFrames" at version "0.20" (#92) (@github-actions[bot])
- make readFlowFrame work on FCSs from common flow-based machines (#93) (@exaexa)
- CompatHelper: bump compat for "XLSX" to "0.6" (#94) (@github-actions[bot])
- make the APIs slightly more orthogonal (#95) (@exaexa)
- Update doc (#96) (@laurentheirendt)
- bump version (#97) (@laurentheirendt)
- make distributed_mapreduce much less memory-hungry (#98) (@exaexa)
- CompatHelper: add new compat entry for "JSON" at version "0.21" (#99) (@github-actions[bot])
- Regular merge of develop (#100) (@laurentheirendt)

See github.com/LCSB-BioCore/GigaSOM.jl/releases/tag/v0.2.2 for release notes

See github.com/LCSB-BioCore/GigaSOM.jl/releases/tag/v0.2.1 for release notes