From 145f253826a309467571712056364503172ba990 Mon Sep 17 00:00:00 2001
From: Piotr Gawron <piotr.gawron@uni.lu>
Date: Wed, 29 Aug 2018 09:31:14 +0200
Subject: [PATCH] central line in reduced notation should be drawn differently
---
.../java/lcsb/mapviewer/model/map/reaction/Reaction.java | 8 +++++---
1 file changed, 5 insertions(+), 3 deletions(-)
diff --git a/model/src/main/java/lcsb/mapviewer/model/map/reaction/Reaction.java b/model/src/main/java/lcsb/mapviewer/model/map/reaction/Reaction.java
index 0d1ce039b1..84d23941b6 100644
--- a/model/src/main/java/lcsb/mapviewer/model/map/reaction/Reaction.java
+++ b/model/src/main/java/lcsb/mapviewer/model/map/reaction/Reaction.java
@@ -45,6 +45,7 @@ import lcsb.mapviewer.model.map.kinetics.SbmlKinetics;
import lcsb.mapviewer.model.map.model.Model;
import lcsb.mapviewer.model.map.model.ModelData;
import lcsb.mapviewer.model.map.reaction.type.ReactionRect;
+import lcsb.mapviewer.model.map.reaction.type.ReducedNotation;
import lcsb.mapviewer.model.map.reaction.type.TwoProductReactionInterface;
import lcsb.mapviewer.model.map.reaction.type.TwoReactantReactionInterface;
import lcsb.mapviewer.model.map.species.Element;
@@ -469,9 +470,7 @@ public class Reaction implements BioEntity {
if (firstOperator != null) {
startPoint = firstOperator.getLine().getPoints().get(firstOperator.getLine().getPoints().size() - 2);
}
- }
-
- if (this instanceof TwoProductReactionInterface) {
+ } else if (this instanceof TwoProductReactionInterface) {
NodeOperator firstOperator = null;
@@ -483,6 +482,9 @@ public class Reaction implements BioEntity {
if (firstOperator != null) {
endPoint = firstOperator.getLine().getPoints().get(firstOperator.getLine().getPoints().size() - 2);
}
+ } else if (this instanceof ReducedNotation) {
+ startPoint = reactant.getLine().getEndPoint();
+ endPoint = product.getLine().getBeginPoint();
}
return new Line2D.Double(startPoint, endPoint);
--
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