From 3fa93fd3d11c0f6a4c8e885476ba611947a6f2b7 Mon Sep 17 00:00:00 2001
From: "piotr.gawron" <piotr.gawron@uni-new>
Date: Fri, 23 Sep 2016 10:25:59 +0200
Subject: [PATCH] fix on drugbank web changes
---
.../annotation/services/DrugbankHTMLParser.java | 11 +++++++----
1 file changed, 7 insertions(+), 4 deletions(-)
diff --git a/annotation/src/main/java/lcsb/mapviewer/annotation/services/DrugbankHTMLParser.java b/annotation/src/main/java/lcsb/mapviewer/annotation/services/DrugbankHTMLParser.java
index af30076168..9239e2cecc 100644
--- a/annotation/src/main/java/lcsb/mapviewer/annotation/services/DrugbankHTMLParser.java
+++ b/annotation/src/main/java/lcsb/mapviewer/annotation/services/DrugbankHTMLParser.java
@@ -197,8 +197,12 @@ public class DrugbankHTMLParser extends DrugAnnotation implements IExternalServi
String description = webpageContent.substring(startIndex, endIndex);
// find special html characters
description = StringEscapeUtils.unescapeHtml4(description);
+ description = cleanHtml(description);
+ if (description.equalsIgnoreCase("Not Available")) {
+ description = null;
+ }
- return cleanHtml(description);
+ return description;
}
/**
@@ -390,9 +394,8 @@ public class DrugbankHTMLParser extends DrugAnnotation implements IExternalServi
* @throws DrugSearchException
* thrown when there are problems with connection to DrugBank
* database
- * @return
- * drug with the information abtained from drugbank or
- * <code>null</code> if such data couldn't be found
+ * @return drug with the information abtained from drugbank or
+ * <code>null</code> if such data couldn't be found
*/
private Drug findMoreInformation(String name) throws DrugSearchException {
Drug result = null;
--
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