From a82625d3cdc9ad8766805acf2bbdab14e77d992a Mon Sep 17 00:00:00 2001
From: Piotr Gawron <piotr.gawron@uni.lu>
Date: Wed, 12 Sep 2018 16:01:10 +0200
Subject: [PATCH] taxonomy changed html response
---
.../lcsb/mapviewer/annotation/services/TaxonomyBackend.java | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/annotation/src/main/java/lcsb/mapviewer/annotation/services/TaxonomyBackend.java b/annotation/src/main/java/lcsb/mapviewer/annotation/services/TaxonomyBackend.java
index 813d91a087..8eb2db5bbc 100644
--- a/annotation/src/main/java/lcsb/mapviewer/annotation/services/TaxonomyBackend.java
+++ b/annotation/src/main/java/lcsb/mapviewer/annotation/services/TaxonomyBackend.java
@@ -108,7 +108,7 @@ public class TaxonomyBackend extends CachableInterface implements IExternalServi
queryTerm = URLEncoder.encode(queryTerm, "UTF-8");
String url = "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?lvl=0&name=" + queryTerm;
String page = getWebPageContent(url);
- Pattern idPattern = Pattern.compile("<em>Taxonomy ID: </em>([0-9]+)");
+ Pattern idPattern = Pattern.compile("Taxonomy ID: ([0-9]+)");
Matcher matcher = idPattern.matcher(page);
if (!matcher.find()) {
logger.warn("Unknown organism: " + term);
--
GitLab