From f882b12c3fe3a07b913edd0afb5b674198ca12f0 Mon Sep 17 00:00:00 2001
From: Piotr Gawron <piotr.gawron@uni.lu>
Date: Mon, 19 Nov 2018 13:48:14 +0100
Subject: [PATCH] proper conversion to input string added
---
.../mapviewer/converter/model/sbgnml/SbgnmlXmlConverter.java | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/converter-SBGNML/src/main/java/lcsb/mapviewer/converter/model/sbgnml/SbgnmlXmlConverter.java b/converter-SBGNML/src/main/java/lcsb/mapviewer/converter/model/sbgnml/SbgnmlXmlConverter.java
index 08174a6e20..ee8b701a4e 100644
--- a/converter-SBGNML/src/main/java/lcsb/mapviewer/converter/model/sbgnml/SbgnmlXmlConverter.java
+++ b/converter-SBGNML/src/main/java/lcsb/mapviewer/converter/model/sbgnml/SbgnmlXmlConverter.java
@@ -3,12 +3,14 @@
*/
package lcsb.mapviewer.converter.model.sbgnml;
+import java.io.ByteArrayInputStream;
import java.io.File;
import java.io.FileInputStream;
import java.io.FileOutputStream;
import java.io.IOException;
import java.io.InputStream;
import java.io.OutputStream;
+import java.nio.charset.StandardCharsets;
import javax.xml.bind.JAXBException;
@@ -16,7 +18,6 @@ import org.apache.commons.io.IOUtils;
import org.apache.commons.lang3.StringEscapeUtils;
import org.apache.log4j.Logger;
import org.apache.log4j.spi.LoggingEvent;
-import org.apache.tools.ant.filters.StringInputStream;
import org.sbgn.SbgnUtil;
import org.sbgn.bindings.Sbgn;
@@ -76,7 +77,7 @@ public class SbgnmlXmlConverter implements IConverter {
StringEscapeUtils.escapeXml(notes.toString()) + "\n</html:body></notes> ";
xml = xml.substring(0, position) + notesNode + xml.substring(position, xml.length());
}
- result = new StringInputStream(xml);
+ result = new ByteArrayInputStream(xml.getBytes(StandardCharsets.UTF_8));
}
return result;
} catch (IOException e) {
--
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