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  • #1444

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Created Jan 22, 2021 by Augustin Luna@cannin

Differences in CD2SBGNML Versus Minerva SBGNML Export

@marek.ostaszewski The Minerva export seems to miss entries that are available via CD2SBGNML. Using the apoptosis pathway as an example:

https://covid19map.elixir-luxembourg.org/minerva/?submap=591&x=690&y=566&zoom=4&searchCoordinates=872,520,591,4&

The CD2SBGNML file is 2x as big. I have not examined all the possible differences, but one difference seems to be fewer nodes. Orf3a does not appear in the Minerva export.

There is a separate issue: #1443 in that some key SBGN editors are not able to parse the Minerva SBGNML export, which may be useful in manual debugging of export issues (as of today progress is being made on this issue).

minerva_apoptosis.sbgn

cd2sbgnml_Apoptosis_stable.xml.sbgn

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