MINERVANET - Error Report 11598

id: 11598

url: https://lux1.atcomp.pl/minerva/index.html?id=asthma_appu_test&perfectMatch=false&modelId=117&backgroundId=22&x=2229&y=1351&z=4.14180755707698

login: admin

email:

browser: Mozilla/5.0 (X11; Linux x86_64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/128.0.0.0 Safari/537.36

timestamp: 2024-09-17T10:37:44Z

version: 18.0.0~beta.1

comment:

stacktrace: ```(Request URL: https://lux1.atcomp.pl/minerva/new_api/projects/asthma_appu_test/models/117/bioEntities/elements/57231) AxiosError: Request failed with status code 500

at https://lux1.atcomp.pl/minerva/_next/static/chunks/pages/_app-218b37f968f08709.js:29:19757

at XMLHttpRequest.h (https://lux1.atcomp.pl/minerva/_next/static/chunks/pages/_app-218b37f968f08709.js:29:19897)```

Java stacktrace: ```lcsb.mapviewer.web.api.InternalServerErrorException: Problem with response serialization

at lcsb.mapviewer.web.api.NewApiResponseSerializer.prepareResponse(NewApiResponseSerializer.java:109)

at lcsb.mapviewer.web.api.NewApiResponseSerializer.prepareResponse(NewApiResponseSerializer.java:90)

at lcsb.mapviewer.web.api.project.map.bioentity.elements.NewElementsController.listElements(NewElementsController.java:106)

at lcsb.mapviewer.web.api.project.map.bioentity.elements.NewElementsController$$FastClassBySpringCGLIB$$7f05cd5c.invoke(<generated>)

at org.springframework.cglib.proxy.MethodProxy.invoke(MethodProxy.java:218)

at org.springframework.aop.framework.CglibAopProxy$CglibMethodInvocation.invokeJoinpoint(CglibAopProxy.java:792)

at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:163)

at org.springframework.aop.framework.CglibAopProxy$CglibMethodInvocation.proceed(CglibAopProxy.java:762)

at org.springframework.security.access.intercept.aopalliance.MethodSecurityInterceptor.invoke(MethodSecurityInterceptor.java:67)

at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)

at org.springframework.aop.framework.CglibAopProxy$CglibMethodInvocation.proceed(CglibAopProxy.java:762)

at org.springframework.aop.framework.CglibAopProxy$DynamicAdvisedInterceptor.intercept(CglibAopProxy.java:707)

at lcsb.mapviewer.web.api.project.map.bioentity.elements.NewElementsController$$EnhancerBySpringCGLIB$$fe24c500.listElements(<generated>)

at jdk.internal.reflect.GeneratedMethodAccessor67.invoke(Unknown Source)

at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)

at java.base/java.lang.reflect.Method.invoke(Method.java:566)

at org.springframework.web.method.support.InvocableHandlerMethod.doInvoke(InvocableHandlerMethod.java:205)

at org.springframework.web.method.support.InvocableHandlerMethod.invokeForRequest(InvocableHandlerMethod.java:150)

at org.springframework.web.servlet.mvc.method.annotation.ServletInvocableHandlerMethod.invokeAndHandle(ServletInvocableHandlerMethod.java:117)

at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.invokeHandlerMethod(RequestMappingHandlerAdapter.java:895)

at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.handleInternal(RequestMappingHandlerAdapter.java:808)

at org.springframework.web.servlet.mvc.method.AbstractHandlerMethodAdapter.handle(AbstractHandlerMethodAdapter.java:87)

at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:1072)

at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:965)

at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:1006)

at org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:898)

at javax.servlet.http.HttpServlet.service(HttpServlet.java:529)

at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:883)

at javax.servlet.http.HttpServlet.service(HttpServlet.java:623)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:209)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:153)

at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:51)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:178)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:153)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:352)

at org.springframework.security.web.access.intercept.AuthorizationFilter.doFilter(AuthorizationFilter.java:100)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:126)

at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:120)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:131)

at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:85)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:100)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:164)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:63)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at lcsb.mapviewer.web.bean.utils.CORSFilter.doFilter(CORSFilter.java:48)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at lcsb.mapviewer.web.bean.utils.CacheFilter.doFilter(CacheFilter.java:56)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at lcsb.mapviewer.web.bean.utils.XFrameFilter.doFilter(XFrameFilter.java:42)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.session.ConcurrentSessionFilter.doFilter(ConcurrentSessionFilter.java:151)

at org.springframework.security.web.session.ConcurrentSessionFilter.doFilter(ConcurrentSessionFilter.java:129)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:227)

at org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:221)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:227)

at org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:221)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.oauth2.client.web.OAuth2AuthorizationRequestRedirectFilter.doFilterInternal(OAuth2AuthorizationRequestRedirectFilter.java:187)

at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:107)

at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:93)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.header.HeaderWriterFilter.doHeadersAfter(HeaderWriterFilter.java:90)

at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:75)

at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:117)

at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:87)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:62)

at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.session.DisableEncodeUrlFilter.doFilterInternal(DisableEncodeUrlFilter.java:42)

at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117)

at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:361)

at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:225)

at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:190)

at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:354)

at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:267)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:178)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:153)

at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:201)

at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:178)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:153)

at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:168)

at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:90)

at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:481)

at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:130)

at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:93)

at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74)

at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:342)

at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:390)

at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:63)

at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:928)

at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1794)

at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:52)

at org.apache.tomcat.util.threads.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1191)

at org.apache.tomcat.util.threads.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:659)

at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)

at java.base/java.lang.Thread.run(Thread.java:829)

Caused by: com.fasterxml.jackson.databind.exc.InvalidDefinitionException: No serializer found for class org.hibernate.proxy.pojo.bytebuddy.ByteBuddyInterceptor and no properties discovered to create BeanSerializer (to avoid exception, disable SerializationFeature.FAIL_ON_EMPTY_BEANS) (through reference chain: lcsb.mapviewer.model.map.species.Phenotype["glyph"]->lcsb.mapviewer.model.map.layout.graphics.GlyphHibernateProxyvYLPpv6V["hibernateLazyInitializer"])

at com.fasterxml.jackson.databind.exc.InvalidDefinitionException.from(InvalidDefinitionException.java:77)

at com.fasterxml.jackson.databind.SerializerProvider.reportBadDefinition(SerializerProvider.java:1300)

at com.fasterxml.jackson.databind.DatabindContext.reportBadDefinition(DatabindContext.java:400)

at com.fasterxml.jackson.databind.ser.impl.UnknownSerializer.failForEmpty(UnknownSerializer.java:46)

at com.fasterxml.jackson.databind.ser.impl.UnknownSerializer.serialize(UnknownSerializer.java:29)

at com.fasterxml.jackson.databind.ser.BeanPropertyWriter.serializeAsField(BeanPropertyWriter.java:728)

at com.fasterxml.jackson.databind.ser.std.BeanSerializerBase.serializeFields(BeanSerializerBase.java:774)

at com.fasterxml.jackson.databind.ser.BeanSerializer.serialize(BeanSerializer.java:178)

at com.fasterxml.jackson.databind.ser.BeanPropertyWriter.serializeAsField(BeanPropertyWriter.java:728)

at com.fasterxml.jackson.databind.ser.std.BeanSerializerBase.serializeFields(BeanSerializerBase.java:774)

at com.fasterxml.jackson.databind.ser.BeanSerializer.serialize(BeanSerializer.java:178)

at com.fasterxml.jackson.databind.ser.DefaultSerializerProvider._serialize(DefaultSerializerProvider.java:480)

at com.fasterxml.jackson.databind.ser.DefaultSerializerProvider.serializeValue(DefaultSerializerProvider.java:319)

at com.fasterxml.jackson.databind.ObjectMapper._writeValueAndClose(ObjectMapper.java:4568)

at com.fasterxml.jackson.databind.ObjectMapper.writeValueAsString(ObjectMapper.java:3821)

at lcsb.mapviewer.web.api.NewApiResponseSerializer.decorateMinervaObject(NewApiResponseSerializer.java:176)

at lcsb.mapviewer.web.api.NewApiResponseSerializer.decorateObject(NewApiResponseSerializer.java:219)

at lcsb.mapviewer.web.api.NewApiResponseSerializer.prepareResponse(NewApiResponseSerializer.java:103)

... 108 more