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Commit 73b09875 authored by Shaman Narayanasamy's avatar Shaman Narayanasamy
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Correct krona table command

parent e6c2c80e
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......@@ -531,7 +531,7 @@ rule ANALYSIS_KRONA_PLOT_MG:
echo "[x] PLOT KRONA `date +"%Y/%m/%d %H:%M:%S"`" >> {log}
echo {input}
echo {output[0]}
python {SRCDIR}/genes.to.kronaTable.py -i {input[0]} -H {input[1]} -m {input[2]} -c {input[3]} -L {input[4]} -o {output[0]}
python {SRCDIR}/genes.to.kronaTable.py -i {input[0]} -m {input[1]} -H {input[2]} -c {input[3]} -L {input[4]} -o {output[0]}
ktImportText -o {output[1]} {output[0]}
"""
......
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