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Commit 744a0577 authored by Shaman Narayanasamy's avatar Shaman Narayanasamy
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Fix bug in pathway2hiererchy file cleaning

parent 7a5d2782
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......@@ -234,6 +234,6 @@ rule _DOWNLOAD_KEGG_INFORMATION:
rm {DBPATH}/ec2pathway.txt.tmp
wget http://rest.kegg.jp/list/pathway -O {DBPATH}/pathway2hierarchy.txt.tmp
grep "path:ec" {DBPATH}/pathway2hierarchy.txt.tmp | sed -e 's/path:map//g' > {DBPATH}/pathway2hierarchy.txt
cat {DBPATH}/pathway2hierarchy.txt.tmp | sed -e 's/path:map//g' > {DBPATH}/pathway2hierarchy.txt
rm {DBPATH}/pathway2hierarchy.txt.tmp
"""
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