Commits · 8608c194e10e74bbf64dcdf5503f2f7f33e7d669 · IMP-dev / IMP

Jul 17, 2015
- extract initialization from core workflow · 8608c194
  Yohan Jarosz authored 9 years ago
  
  8608c194
- change to hg38 · 40ed497a
  Yohan Jarosz authored 9 years ago
  
  40ed497a
- add ht2-stat draw script · 91ca23eb
  Yohan Jarosz authored 9 years ago
  
  91ca23eb
- change rm place in command fix#38 · 2246a4df
  Yohan Jarosz authored 9 years ago
  
  2246a4df
- rm container by default #38 · b8830c1d
  Yohan Jarosz authored 9 years ago
  
  b8830c1d
- change output name for htqc tool · f29a0d45
  Yohan Jarosz authored 9 years ago
  
  f29a0d45
- change output name for htqc tool · 4b8a53af
  Yohan Jarosz authored 9 years ago
  
  4b8a53af
- change output name for htqc tool · 5dfe3946
  Yohan Jarosz authored 9 years ago
  
  5dfe3946
- typos · 36f15cee
  Yohan Jarosz authored 9 years ago
  
  36f15cee
- add requirement + fix ht2stat · b210a893
  Yohan Jarosz authored 9 years ago
  
  b210a893
Jul 16, 2015
- add r3 urls · 453f374c
  Yohan Jarosz authored 9 years ago
  
  453f374c
- Merge branch 'dev' of ssh://git-r3lab-server.uni.lu:8022/shaman.narayanasamy/IMP into dev · b830aa60
  Shaman Narayanasamy authored 9 years ago
  
  b830aa60
- Added exception handling for human genome filtering step · 27b14136
  Shaman Narayanasamy authored 9 years ago
  
  27b14136
- rm output dir if exists · f2c09bce
  Yohan Jarosz authored 9 years ago
  
  f2c09bce
- remove --continue parameter for megahit as sometimes it is failing · 8cf197a7
  Yohan Jarosz authored 9 years ago
  
  8cf197a7
- add enter flag at the end · 0a1765cc
  Yohan Jarosz authored 9 years ago
  
  0a1765cc
- add enter flag at the end · f1162c14
  Yohan Jarosz authored 9 years ago
  
  f1162c14
- change prokka defualt url · 4cc6bd0a
  Yohan Jarosz authored 9 years ago
  
  4cc6bd0a
- remove entrypoint · 64ec652c
  Yohan Jarosz authored 9 years ago
  
  64ec652c
- Merge branch 'dev' of ssh://git-r3lab-server.uni.lu:8022/shaman.narayanasamy/IMP into dev · 545e8186
  Shaman Narayanasamy authored 9 years ago
  
  545e8186
- Edit variant calling rules · 9d32ae2e
  Shaman Narayanasamy authored 9 years ago
  
  9d32ae2e
- add trimmimatic db download · 609c21ae
  Yohan Jarosz authored 9 years ago
  
  609c21ae
Jul 15, 2015
- add fiull path to question · a42af544
  Yohan Jarosz authored 9 years ago
  
  a42af544
- check input data · e5ba3540
  Yohan Jarosz authored 9 years ago
  
  e5ba3540
- check output · 03475da6
  Yohan Jarosz authored 9 years ago
  
  03475da6
- check output · f42850e7
  Yohan Jarosz authored 9 years ago
  
  f42850e7
Jul 13, 2015
- suppress debug print · e5344b61
  Yohan Jarosz authored 9 years ago
  
  e5344b61
- Dtest · 74e5c1da
  Yohan Jarosz authored 9 years ago
  
  74e5c1da
- fix CL · d3fa66b7
  Yohan Jarosz authored 9 years ago
  
  d3fa66b7
- modify CL · 9a5cc210
  Yohan Jarosz authored 9 years ago
  
  9a5cc210
Jul 11, 2015
- Simpler and more efficient CL wrapper · 7f5627e5
  Yohan Jarosz authored 9 years ago
  
  7f5627e5
Jul 10, 2015
- Adjust sortmerna memory parameter · e32c2716
  Shaman Narayanasamy authored 9 years ago
  
  e32c2716
- typo · caa8b2f8
  Yohan Jarosz authored 9 years ago
  
  caa8b2f8
- create output if not exist · a4107cfe
  Yohan Jarosz authored 9 years ago
  
  a4107cfe
- add some doc · 248d8091
  Yohan Jarosz authored 9 years ago
  
  248d8091
- fix doc · 41917170
  Yohan Jarosz authored 9 years ago
  
  41917170
- fix how CL works · 5f007541
  Yohan Jarosz authored 9 years ago
  
  5f007541
- supress output of version every time IMP script is launch · 940fb616
  Yohan Jarosz authored 9 years ago
  
  940fb616
- give the commit hash for version flag · 1faec514
  Yohan Jarosz authored 9 years ago
  
  1faec514
Jul 09, 2015
- add command line wrapper for IMP · bf1c3f6d
  Yohan Jarosz authored 9 years ago
  
  bf1c3f6d