Commits · b5fb8c2a5ad45cc4057d15f5b0d655ad9745cdad · IMP-dev / IMP

Jul 20, 2015
- start modifying report · b5fb8c2a
  Yohan Jarosz authored 9 years ago
  
  b5fb8c2a
- Add fastqc rules · fc26476c
  Shaman Narayanasamy authored 9 years ago
  
  fc26476c
- fix mistake · b63f0f20
  Yohan Jarosz authored 9 years ago
  
  b63f0f20
- add P_OUT by default · b2f7ddec
  Yohan Jarosz authored 9 years ago
  
  b2f7ddec
- mirro fastqc · 2d611ed9
  Yohan Jarosz authored 9 years ago
  
  2d611ed9
- fix #7 · 8bd395e1
  Yohan Jarosz authored 9 years ago
  
  8bd395e1
- Add fastqc build and it's dependencies to dockerfile · b553a13d
  Shaman Narayanasamy authored 9 years ago
  
  b553a13d
Jul 17, 2015
- /code · 62fa28d0
  Yohan Jarosz authored 9 years ago
  
  62fa28d0
- bug · 3e067bab
  Yohan Jarosz authored 9 years ago
  
  3e067bab
- add mt | mg processing · 7a6fda4b
  Yohan Jarosz authored 9 years ago
  
  7a6fda4b
- bug · 3fd016a2
  Yohan Jarosz authored 9 years ago
  
  3fd016a2
- add shlex · a4339b61
  Yohan Jarosz authored 9 years ago
  
  a4339b61
- bug · 4735f413
  Yohan Jarosz authored 9 years ago
  
  4735f413
- add init.rule · 4b54d424
  Yohan Jarosz authored 9 years ago
  
  4b54d424
- rm snakemake dependencie · bf2d2722
  Yohan Jarosz authored 9 years ago
  
  bf2d2722
- extract initialization from core workflow · 8608c194
  Yohan Jarosz authored 9 years ago
  
  8608c194
- change to hg38 · 40ed497a
  Yohan Jarosz authored 9 years ago
  
  40ed497a
- add ht2-stat draw script · 91ca23eb
  Yohan Jarosz authored 9 years ago
  
  91ca23eb
- change rm place in command fix#38 · 2246a4df
  Yohan Jarosz authored 9 years ago
  
  2246a4df
- rm container by default #38 · b8830c1d
  Yohan Jarosz authored 9 years ago
  
  b8830c1d
- change output name for htqc tool · f29a0d45
  Yohan Jarosz authored 9 years ago
  
  f29a0d45
- change output name for htqc tool · 4b8a53af
  Yohan Jarosz authored 9 years ago
  
  4b8a53af
- change output name for htqc tool · 5dfe3946
  Yohan Jarosz authored 9 years ago
  
  5dfe3946
- typos · 36f15cee
  Yohan Jarosz authored 9 years ago
  
  36f15cee
- add requirement + fix ht2stat · b210a893
  Yohan Jarosz authored 9 years ago
  
  b210a893
Jul 16, 2015
- add r3 urls · 453f374c
  Yohan Jarosz authored 9 years ago
  
  453f374c
- Merge branch 'dev' of ssh://git-r3lab-server.uni.lu:8022/shaman.narayanasamy/IMP into dev · b830aa60
  Shaman Narayanasamy authored 9 years ago
  
  b830aa60
- Added exception handling for human genome filtering step · 27b14136
  Shaman Narayanasamy authored 9 years ago
  
  27b14136
- rm output dir if exists · f2c09bce
  Yohan Jarosz authored 9 years ago
  
  f2c09bce
- remove --continue parameter for megahit as sometimes it is failing · 8cf197a7
  Yohan Jarosz authored 9 years ago
  
  8cf197a7
- add enter flag at the end · 0a1765cc
  Yohan Jarosz authored 9 years ago
  
  0a1765cc
- add enter flag at the end · f1162c14
  Yohan Jarosz authored 9 years ago
  
  f1162c14
- change prokka defualt url · 4cc6bd0a
  Yohan Jarosz authored 9 years ago
  
  4cc6bd0a
- remove entrypoint · 64ec652c
  Yohan Jarosz authored 9 years ago
  
  64ec652c
- Merge branch 'dev' of ssh://git-r3lab-server.uni.lu:8022/shaman.narayanasamy/IMP into dev · 545e8186
  Shaman Narayanasamy authored 9 years ago
  
  545e8186
- Edit variant calling rules · 9d32ae2e
  Shaman Narayanasamy authored 9 years ago
  
  9d32ae2e
- add trimmimatic db download · 609c21ae
  Yohan Jarosz authored 9 years ago
  
  609c21ae
Jul 15, 2015
- add fiull path to question · a42af544
  Yohan Jarosz authored 9 years ago
  
  a42af544
- check input data · e5ba3540
  Yohan Jarosz authored 9 years ago
  
  e5ba3540
- check output · 03475da6
  Yohan Jarosz authored 9 years ago
  
  03475da6

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