Commits · c49c95ca5557d2295192037cf80fa969719b03a7 · IMP-dev / IMP

Aug 26, 2015
- R plotting fix · c49c95ca
  Shaman Narayanasamy authored 9 years ago
  
  c49c95ca
Aug 25, 2015
- Dockerfile, R plot script · 1f3dc511
  Shaman Narayanasamy authored 9 years ago
  
  1f3dc511
Jul 25, 2015
- Change bandwidth for plotting method · f569056e
  Shaman Narayanasamy authored 9 years ago
  
  f569056e
Jul 17, 2015
- extract initialization from core workflow · 8608c194
  Yohan Jarosz authored 9 years ago
  
  8608c194
- change to hg38 · 40ed497a
  Yohan Jarosz authored 9 years ago
  
  40ed497a
Jul 16, 2015
- add r3 urls · 453f374c
  Yohan Jarosz authored 9 years ago
  
  453f374c
- change prokka defualt url · 4cc6bd0a
  Yohan Jarosz authored 9 years ago
  
  4cc6bd0a
Jul 08, 2015
- Remove some commented stuff · 665ed675
  Shaman Narayanasamy authored 9 years ago
  
  665ed675
- change image size and comment old commands · 20634379
  Shaman Narayanasamy authored 9 years ago
  
  20634379
Jul 07, 2015
- default config · b9a1a8e9
  Yohan Jarosz authored 9 years ago
  
  b9a1a8e9
- add new vizbin jar file · e042b12d
  Yohan Jarosz authored 9 years ago
  
  e042b12d
Jun 12, 2015
- Add perl script to filter length · 2dbf2b7b
  Shaman Narayanasamy authored 9 years ago
  
  2dbf2b7b
Jun 02, 2015
- change table path · 1ed68937
  Yohan Jarosz authored 9 years ago
  
  1ed68937
- Correct KEGG url. Again... · 3e6a71a0
  Shaman Narayanasamy authored 9 years ago
  
  3e6a71a0
- Correct KEGG download link · 38a2822e
  Shaman Narayanasamy authored 9 years ago
  
  38a2822e
- add a main · 46ab14ef
  Yohan Jarosz authored 9 years ago
  
  46ab14ef
Jun 01, 2015
- use PEP for python · 8577a035
  Yohan Jarosz authored 9 years ago
  
  8577a035
- change config names · 79ba1711
  Yohan Jarosz authored 9 years ago
  
  79ba1711
- you can set the kegg url in config file · a5ee10eb
  Yohan Jarosz authored 9 years ago
  
  a5ee10eb
- change kegg download rule · 9842acc4
  Yohan Jarosz authored 9 years ago
  
  9842acc4
- change default config for tmp and data · 010fa108
  Yohan Jarosz authored 9 years ago
  
  010fa108
- require genomeintervals before checkpoint · c3b2d73c
  Yohan Jarosz authored 9 years ago
  
  c3b2d73c
- set scan for ackages to false · ffdc3af8
  Yohan Jarosz authored 9 years ago
  
  ffdc3af8
- genomeIntervals package · a4172c1c
  Shaman Narayanasamy authored 9 years ago
  
  a4172c1c
May 28, 2015
- Add R checkpoint and prokka R3 download · 19bafa0d
  Shaman Narayanasamy authored 9 years ago
  
  19bafa0d
May 05, 2015
- Edit MT visualization script · 25826cbb
  Shaman Narayanasamy authored 9 years ago
  
  25826cbb
- Edit MG rules · a6af354c
  Shaman Narayanasamy authored 9 years ago
  
  a6af354c
Apr 30, 2015
- Change permission · eb358b43
  Shaman Narayanasamy authored 9 years ago
  
  eb358b43
- Move R functions to separate file · 40ac79a3
  Shaman Narayanasamy authored 9 years ago
  
  40ac79a3
- Edit and clean up R scripts · 9feb8682
  Shaman Narayanasamy authored 9 years ago
  
  9feb8682
- Remove MT-based functions · 4bfe289a
  Shaman Narayanasamy authored 9 years ago
  
  4bfe289a
- Add MT and MG only R plot scripts · 88a0dfbb
  Shaman Narayanasamy authored 9 years ago
  
  88a0dfbb
Apr 28, 2015
- add Reproducible checkpoint library · a40f5db2
  Yohan Jarosz authored 9 years ago
  
  a40f5db2
Apr 27, 2015
- Fix R syntax according to new R version · 403a828c
  Shaman Narayanasamy authored 9 years ago
  
  403a828c
- remove comment · b4b1eb95
  Shaman Narayanasamy authored 9 years ago
  
  b4b1eb95
Apr 21, 2015
- change default config · e3a444a8
  Yohan Jarosz authored 9 years ago
  
  e3a444a8
Apr 14, 2015
- flatten config file + fix log overwrite on some rules · 3f582764
  Yohan Jarosz authored 9 years ago
  
  3f582764
Apr 13, 2015
- remove pre command as the purpose was to load environment modules, but they... · 8b138ff7
  Yohan Jarosz authored 9 years ago
  
  remove pre command as the purpose was to load environment modules, but they are loaded in a subshell
  8b138ff7
Apr 02, 2015
- change to prokka-1.11 · 5a844ab9
  Yohan Jarosz authored 9 years ago
  
  5a844ab9
Mar 31, 2015
- put databases in root directory · 42639633
  Yohan Jarosz authored 9 years ago
  
  42639633