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- rules/Assembly/hybrid/idba.hybrid.rules 80 additions, 0 deletionsrules/Assembly/hybrid/idba.hybrid.rules
- rules/Assembly/hybrid/megahit.hybrid.rules 69 additions, 0 deletionsrules/Assembly/hybrid/megahit.hybrid.rules
- rules/Assembly/hybrid/merge-hybrid-assembly.rules 18 additions, 0 deletionsrules/Assembly/hybrid/merge-hybrid-assembly.rules
- rules/Assembly/master.rules 0 additions, 42 deletionsrules/Assembly/master.rules
- rules/Assembly/single-omic/extract-unmapped.rules 41 additions, 0 deletionsrules/Assembly/single-omic/extract-unmapped.rules
- rules/Binning/MaxBin/get_contig2bin.rule 11 additions, 0 deletionsrules/Binning/MaxBin/get_contig2bin.rule
- rules/Binning/MaxBin/maxbin.rule 29 additions, 0 deletionsrules/Binning/MaxBin/maxbin.rule
- rules/Binning/MaxBin/maxbin_get_depth.rule 13 additions, 0 deletionsrules/Binning/MaxBin/maxbin_get_depth.rule
- rules/Binning/MaxBin/visualize_maxBin.rule 16 additions, 0 deletionsrules/Binning/MaxBin/visualize_maxBin.rule
- rules/Binning/binny/binning.rule 19 additions, 0 deletionsrules/Binning/binny/binning.rule
- rules/Binning/binny/checkm.rule 24 additions, 0 deletionsrules/Binning/binny/checkm.rule
- rules/Binning/binny/essential-gene_info.rule 15 additions, 0 deletionsrules/Binning/binny/essential-gene_info.rule
- rules/Binning/binny/extract-essential-genes.rule 30 additions, 0 deletionsrules/Binning/binny/extract-essential-genes.rule
- rules/Binning/binny/find-essential-genes.rule 30 additions, 0 deletionsrules/Binning/binny/find-essential-genes.rule
- rules/Binning/binny/separate-bins.rule 13 additions, 0 deletionsrules/Binning/binny/separate-bins.rule
- rules/Preprocessing/MT.rules 0 additions, 134 deletionsrules/Preprocessing/MT.rules
- rules/Preprocessing/data_input.rules 119 additions, 0 deletionsrules/Preprocessing/data_input.rules
- rules/Preprocessing/filtering.rules 84 additions, 0 deletionsrules/Preprocessing/filtering.rules
- rules/Preprocessing/master.rules 0 additions, 86 deletionsrules/Preprocessing/master.rules
- rules/Preprocessing/no-filtering.rules 41 additions, 0 deletionsrules/Preprocessing/no-filtering.rules
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rules/Binning/MaxBin/get_contig2bin.rule
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rules/Binning/MaxBin/visualize_maxBin.rule
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rules/Binning/binny/binning.rule
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rules/Binning/binny/checkm.rule
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rules/Binning/binny/essential-gene_info.rule
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rules/Binning/binny/separate-bins.rule
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rules/Preprocessing/MT.rules
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rules/Preprocessing/data_input.rules
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rules/Preprocessing/master.rules
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rules/Preprocessing/no-filtering.rules
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