fix taxonomy env and slurm config

config/slurm_simple.config.yaml

@@ -10,6 +10,7 @@ __default__:
 
 bwa_index:
   stdout: "-o IMP3.{rule}.stdout"
+  nodes: "-N 1"
 
 index_bam:
   stdout: "-o IMP3.{rule}.stdout"
@@ -29,9 +30,6 @@ trimming:
 mapping_on_assembly:
   nodes: "-N 1"
 
-index_bam:
-  nodes: "-N 1"
-
 extract_unmapped_from_megahit:
   nodes: "-N 1"
 

workflow/envs/IMP_taxonomy.yaml

@@ -73,7 +73,7 @@ dependencies:
   - pandas=0.25.2=py37hb3f55d8_0
   - pango=1.42.4=ha030887_1
   - pcre=8.43=he1b5a44_0
-  - perl=5.26.2=h516909a_1006
+  - perl=5.26.2
   - pip=19.3.1=py37_0
   - pixman=0.38.0=h516909a_1003
   - pthread-stubs=0.4=h14c3975_1001