Merge branch 'develop' into 'master'

[release] Regular merge of develop

See merge request !319

cards.md

@@ -124,18 +124,12 @@ order: -1
 
 		</ul>
 	</div>
-	<div class="index-box noborderbox" id="ppc-card">
-		<h3>PPC</h3>
-		<ul>
-			<li><a href="{{ 'external/ppc/add-gitignore' | relative_url }}">Add a .gitignore to your repository</a></li>
-			<li><a href="{{ 'external/ppc/publish-repo' | relative_url }}">Publish a repository</a></li>
-
-		</ul>
-	</div>
 	<div class="index-box noborderbox" id="publication-card">
 		<h3>Publication</h3>
 		<ul>
 			<li><a href="{{ 'external/publication/10WaysImproveEnglish' | relative_url }}">10 ways to improve your English</a></li>
+			<li><a href="{{ 'external/publication/add-gitignore' | relative_url }}">Add a .gitignore to your repository</a></li>
+			<li><a href="{{ 'external/publication/publish-repo' | relative_url }}">Publish a repository</a></li>
 			<li><a href="{{ 'external/publication/publishInBiotools' | relative_url }}">Publishing a tool in *bio.tools*</a></li>
 
 		</ul>

external/contribute/markdown/markdown.md

@@ -103,7 +103,7 @@ Another big advantage of Markdown is that it can contain HTML tags, which makes
 |: ^^## Actions |: ^^ <h2>Actions</h2>
 |: ^^- [ ] Josh, Alice and Cindy will do this. |: ^^ - [ ] Josh, Alice and Cindy will do this.
 |: ^^- [x] Bob stops doing that. |: ^^ - [x] Bob stops doing that.
-|: ^^- [ ] Will and Tom will take care of those </pre> |: ^^ - [ ] Will and Tom will take care of those </pre>
+|: ^^- [ ] Will and Tom will take care of those </pre> |: ^^ - [ ] Will and Tom will take care of those
 
 * **Analyses, reports and papers** - embedding [R markdown](https://rmarkdown.rstudio.com/) in an R project allows you to include executable code and related text in the very same document. This brings unprecedented level of consistency, shareability and reproducibility into the workflows.
 * **Online discussion forums** - many scientific and non-scientific discussion forums and social networks support Markdown for formatting the content of messages (e.g. [StackOverflow](https://stackoverflow.com/editing-help), [GitHub](https://help.github.com/en/github/writing-on-github/basic-writing-and-formatting-syntax), Reddit or even Facebook)

external/ppc/add-gitignore/add-gitignore.md → external/publication/add-gitignore/add-gitignore.md

 ---
 layout: page
-permalink: /external/ppc/add-gitignore/
-shortcut: ppc:add-gitignore
+permalink: /external/publication/add-gitignore/
+shortcut: publication:add-gitignore
 redirect_from:
-  - /cards/ppc:add-gitignore
-  - /external/cards/ppc:add-gitignore
+  - /cards/publication:add-gitignore
+  - /external/cards/publication:add-gitignore
 ---
 
 # Add a .gitignore to your repository

external/ppc/publish-repo/publish-repo.md → external/publication/publish-repo/publish-repo.md

 ---
 layout: page
-permalink: /external/ppc/publish-repo/
-shortcut: ppc:publish-repo
+permalink: /external/publication/publish-repo/
+shortcut: publication:publish-repo
 redirect_from:
-  - /cards/ppc:publish-repo
-  - /external/cards/ppc:publish-repo
+  - /cards/publication:publish-repo
+  - /external/cards/publication:publish-repo
 ---
 
 # Publish a repository

external/publication/publishInBiotools/publishInBiotools.md

@@ -25,8 +25,7 @@ contents immediately visible.
 
 ### Use search and consult the curation guide to resolve ambiguities
 
-The guide is currently here:
-https://biotools.readthedocs.io/en/latest/curators_guide.html#summary-group
+The guide is currently [here](https://biotools.readthedocs.io/en/latest/curators_guide.html#summary-group).
 
 It includes helpful and authoritative guidelines for almost all fields that you
 can fill, including examples.
@@ -85,6 +84,17 @@ platform, community _and_ collection. Remember to:
   - there is search support only for the collections; currently (March 2021) it
     seems that you cannot easily search for tools by ELIXIR nodes
 
+On top of that (but also if the tool is not related to ELIXIR) you add further collections:
+
+|Group                   | Collection      |
+| ---------------------- | --------------- |
+|University of Luxembourg|            UniLu|
+|LCSB                    |             LCSB|
+|Biomedical Data Science |         LCSB-BDS|
+|Computational Biology   |         LCSB-CBG|
+|Bioinformatics Core     |     LCSB-BioCore|
+
+
 ### Fill in the tool "Function" very verbosely
 
 The main reason for categorizing tool functions is to provide a systematic way

index.md

@@ -64,12 +64,6 @@ The How-to cards are intended to provide practical guidance in implementing Data
             "caption": "I want to publish my article",
             "icon": "<i class=\"large material-icons\">menu_book</i>",
             "link": "{{ '/cards#publication' | relative_url }}"
-        },
-        {
-            "title": "PPC",
-            "caption": "I need information on the pre-publication check (PPC)",
-            "icon": "<i class=\"large material-icons\">fact_check</i>",
-            "link": "{{ '/cards#ppc' | relative_url }}"
         }
     ];