Makefile

src/annotateBed/Makefile

src/annotateBed/annotateBed.h

src/bamToBed/Makefile

src/bamToBed/bamToBed.cpp

src/utils/BamTools-Ancillary/BamAncillary.h

src/utils/BamTools-Ancillary/Makefile

src/utils/BamTools/include/api/BamAlignment.h

src/utils/BamTools/include/api/BamAux.h

src/utils/BamTools/include/api/BamConstants.h

src/utils/BamTools/include/api/BamIndex.h

src/utils/BamTools/include/api/BamMultiReader.h

src/utils/BamTools/include/api/BamReader.h

src/utils/BamTools/include/api/BamWriter.h

src/utils/BamTools/include/api/SamConstants.h

src/utils/BamTools/include/api/SamHeader.h

src/utils/BamTools/include/api/SamProgram.h

src/utils/BamTools/include/api/SamProgramChain.h

src/utils/BamTools/include/api/SamReadGroup.h

src/utils/BamTools/include/api/SamReadGroupDictionary.h