Skip to content
Snippets Groups Projects
Commit 0b51d877 authored by Aaron's avatar Aaron
Browse files

tweak healp for -split. cheers to @brentp for the nice addition

parent 9ca99b8f
No related branches found
No related tags found
No related merge requests found
......@@ -139,8 +139,8 @@ void fastafrombed_help(void) {
cerr << "\t-bed\tBED/GFF/VCF file of ranges to extract from -fi" << endl;
cerr << "\t-fo\tOutput file (can be FASTA or TAB-delimited)" << endl;
cerr << "\t-name\tUse the name field for the FASTA header" << endl;
cerr << "\t-split\tgiven a bed12, concat the sequence from exons" << endl;
cerr << "\t-split\tgiven BED12 fmt., extract and concatenate the sequences"
<< "from the BED \"blocks\" (e.g., exons)" << endl;
cerr << "\t-tab\tWrite output in TAB delimited format." << endl;
cerr << "\t\t- Default is FASTA format." << endl << endl;
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment