Revised the Open/Get/Close idiom to check for BED_VALID on each iteration. (28cf141b) · Commits · R3 / legacy / bedtools2 · GitLab

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28cf141b

Commit 28cf141b authored 14 years ago by Aaron

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Revised the Open/Get/Close idiom to check for BED_VALID on each iteration.

parent 76e0758b

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Changes 13

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src/bamFillMateSeq/bamFillMateSeq.cpp 294 additions, 0 deletions

src/bamFillMateSeq/bamFillMateSeq.cpp
src/bedToBam/bedToBam.cpp 18 additions, 12 deletions

src/bedToBam/bedToBam.cpp
src/closestBed/closestBed.cpp 9 additions, 4 deletions

src/closestBed/closestBed.cpp
src/coverageBed/coverageBed.cpp 11 additions, 5 deletions

src/coverageBed/coverageBed.cpp
src/genomeCoverageBed/genomeCoverageBed.cpp 57 additions, 52 deletions

src/genomeCoverageBed/genomeCoverageBed.cpp
src/genomeCoverageBed/genomeCoverageBed.h 4 additions, 4 deletions

src/genomeCoverageBed/genomeCoverageBed.h
src/intersectBed/intersectBed.cpp 9 additions, 4 deletions

src/intersectBed/intersectBed.cpp
src/linksBed/linksBed.cpp 10 additions, 5 deletions

src/linksBed/linksBed.cpp
src/pairToBed/pairToBed.cpp 17 additions, 13 deletions

src/pairToBed/pairToBed.cpp
src/shuffleBed/shuffleBed.cpp 9 additions, 4 deletions

src/shuffleBed/shuffleBed.cpp
src/slopBed/slopBed.cpp 10 additions, 5 deletions

src/slopBed/slopBed.cpp
src/subtractBed/subtractBed.cpp 11 additions, 8 deletions

src/subtractBed/subtractBed.cpp
src/windowBed/windowBed.cpp 8 additions, 4 deletions

src/windowBed/windowBed.cpp

with 467 additions and 120 deletions

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