Skip to content
Snippets Groups Projects
Commit 364f6199 authored by arq5x's avatar arq5x
Browse files

docs formatting

parent 0cd70174
No related branches found
No related tags found
No related merge requests found
......@@ -4,15 +4,16 @@ Release History
Version 2.20.0 (22-May-2014)
============================
1. The ``merge`` tool now supports BAM input.
- The ``-n``, ``-nms``, and ``-scores`` options are deprecated in favor of the new, substantially more flexible, ``-c`` and ``-o`` options. See the `docs <http://bedtools.readthedocs.org/en/latest/content/tools/merge.html>`_.
- It now supports the ``-header`` option.
- It now supports the ``-S`` option.
- The ``-n``, ``-nms``, and ``-scores`` options are deprecated in favor of the new, substantially more flexible, ``-c`` and ``-o`` options. See the `docs <http://bedtools.readthedocs.org/en/latest/content/tools/merge.html>`_.
- It now supports the ``-header`` option.
- It now supports the ``-S`` option.
2. The ``map`` tool now supports BAM input.
3. The ``jaccard`` tool is now ~3 times faster.
- It now supports the ``-split`` option.
- It now supports the ``-s`` option.
- It now supports the ``-S`` option.
- It now supports the ``-split`` option.
- It now supports the ``-s`` option.
- It now supports the ``-S`` option.
4. We have fixed several CLANG compiler issues/ Thanks to John Marshall for the thorough report.
5. We added support for "X" and "=" CIGAR operators. Thanks to Pierre Lindenbaum.
6. Fixed bugs for empty files.
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment