Merge pull request #67 from nkindlon/master (77fae721) · Commits · R3 / legacy / bedtools2 · GitLab

Skip to content

GitLab

Explore

Sign in

Primary navigation

Project

B

bedtools2
- Activity
- Members
- Labels
- Issues
- Issue boards
- Milestones
- Iterations
- Wiki
- Requirements
- External wiki
- Releases
- Model registry
- Environments
- Incidents
- Service Desk

Snippets Groups Projects

77fae721

Commit 77fae721 authored 11 years ago by Aaron Quinlan

Downloads
- Plain Diff

Merge pull request #67 from nkindlon/master

Added jaccard w/ -split and unit tests. Fixed Bam input as bam output bu...

parents d42edc99 e2be0789

No related branches found

No related tags found

Loading

Changes 15

Hide whitespace changes

Inline Side-by-side

Showing

src/jaccard/Jaccard.cpp 94 additions, 0 deletions

src/jaccard/Jaccard.cpp
src/jaccard/Jaccard.h 39 additions, 0 deletions

src/jaccard/Jaccard.h
src/jaccard/Makefile 19 additions, 10 deletions

src/jaccard/Makefile
src/jaccard/jaccard.cpp 0 additions, 110 deletions

src/jaccard/jaccard.cpp
src/jaccard/jaccardMain.cpp 128 additions, 103 deletions

src/jaccard/jaccardMain.cpp
src/utils/Contexts/ContextJaccard.cpp 18 additions, 0 deletions

src/utils/Contexts/ContextJaccard.cpp
src/utils/Contexts/ContextJaccard.h 23 additions, 0 deletions

src/utils/Contexts/ContextJaccard.h
src/utils/Contexts/Makefile 3 additions, 2 deletions

src/utils/Contexts/Makefile
src/utils/FileRecordTools/FileRecordMergeMgr.cpp 16 additions, 7 deletions

src/utils/FileRecordTools/FileRecordMergeMgr.cpp
test/jaccard/a.bam 0 additions, 0 deletions

test/jaccard/a.bam
test/jaccard/e.bed 1 addition, 0 deletions

test/jaccard/e.bed
test/jaccard/test-jaccard.sh 34 additions, 1 deletion

test/jaccard/test-jaccard.sh
test/jaccard/test-jaccard.sh~ 94 additions, 0 deletions

test/jaccard/test-jaccard.sh~
test/jaccard/three_blocks_match.bam 0 additions, 0 deletions

test/jaccard/three_blocks_match.bam
test/jaccard/three_blocks_match.bed 1 addition, 0 deletions

test/jaccard/three_blocks_match.bed

with 470 additions and 233 deletions

Loading

0% Loading or .

You are about to add 0 people to the discussion. Proceed with caution.

Finish editing this message first!

Please register or sign in to comment