docs/content/installation.rst

docs/content/tools/unionbedg.rst

src/mapFile/mapFile.h

src/mapFile/mapMain.cpp

src/mergeFile/mergeMain.cpp

src/utils/Contexts/ContextMap.h

src/utils/FileRecordTools/FileReaders/BufferedStreamMgr.cpp

src/utils/KeyListOps/KeyListOps.cpp

src/utils/KeyListOps/KeyListOpsMethods.cpp

src/utils/KeyListOps/KeyListOpsMethods.h

src/utils/general/QuickString.h

src/utils/general/Tokenizer.cpp

test/intersect/dosLineCharWithExtraTab_b.bed

test/intersect/dosLineChar_a.bed

test/intersect/new_test-intersect.sh

test/map/test-map.sh

test/merge/test-merge.sh