src/bed12ToBed6/bed12ToBed6.cpp

src/bedToBam/bedToBam.cpp

src/closestBed/closestMain.cpp

src/complementBed/complementMain.cpp

src/coverageBed/coverageMain.cpp

src/fastaFromBed/fastaFromBedMain.cpp

src/genomeCoverageBed/genomeCoverageMain.cpp

src/intersectBed/intersectMain.cpp

src/linksBed/linksMain.cpp

src/maskFastaFromBed/maskFastaFromBedMain.cpp

src/mergeBed/mergeMain.cpp

src/pairToBed/pairToBedMain.cpp

src/shuffleBed/shuffleBedMain.cpp

src/slopBed/slopBedMain.cpp

src/sortBed/sortMain.cpp

src/subtractBed/subtractMain.cpp

src/windowBed/windowMain.cpp