Shortened output buffer, corrected Chromsweep errors with some print options due to early termination.

add missing include to prevent compilation error

Update slop.rst

Update quick-start.rst

Fixed typo

Update quick-start.rst

-v on 3rd example too

add -v to example

Change the actual default delim for merge (it's ";" not ",")

ENH: shuffle intervals to non-overlapping locations.

Update merge.rst

Fixed sort command syntax on line 18

Update advanced-usage.rst

Update coverage.rst