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Created with Raphaël 2.2.01Feb31Jan2723222120131110987543219Dec1817161513121196425Nov181413126229Oct2714119328Sep27262524231913111024Aug231615141328Jun271130May30Apr3226Mar21632112Feb3129Jan2827262524161514927Dec261918161312119825Nov14543231Oct302922111018Sep1731Aug30242214824Jul2321201817326Jun198623May20151426Apr230Mar2013119628Feb242321191817161513121187530Jan2928272624231816121085231Dec3029211713128729Nov282517161587432126Oct25242111730Sep2827232216151310865131Aug24Jul19131165130Jun29282423221716151414Apr831map uses PFM.add option -fullHeader for fasta filesadd files to test getfasta with full headerForgot new file for unit testsCorrections and unit tests for split bug.Added another file to intersect unit tests for split blocks testing.Update cluster.rstNew unit test for -split -woFixed split bug, added field number accessibility.formatting[ENH] add str() method to QuickString[BUG] change getField() logic in GffRecord[ENH] add absmin and absmax to VectorOps and map tool.[TST] add new tests for mapMerge remote-tracking branch 'upstream/master'first pass at using Context and PFM for the map tool.tweak[TST] new unit tests for proper field reporting for BED* intersectionsMerge pull request #20 from nkindlon/masterMerge remote-tracking branch 'upstream/master'Changed handling of strand in records to allow non-strand strings in sixth field of records.Merge branch 'master' of https://github.com/arq5x/bedtools2[BUG] fix extra TAB at EOL in the annotate tool.Update README.rstMerge pull request #15 from nkindlon/masterSetting Release-Version v2.18.2v2.18.2v2.18.2Refactored Context class into Base and Derived classes for cleaner future development.ask travis to auto-run unit tests.tweak travis configadd travis configUpdate README.rstMerge pull request #14 from nkindlon/masterAdded fix for Bam files with empty headers. Added test for this to unit test.[DOC] cleanup docs to facilitate man page creation.[DOC] fix docs typosMerge pull request #7 from nkindlon/masterAdded -nobuf option and definition to intersect help menu.Merge pull request #6 from nkindlon/masterAdded -nobuf option, and changed flush to occur after every record if -nobuf is set.Changed outbuf size constant to 16384 from 16386, which was a mistake.