Commits · repo_update · COVID-19 / models · GitLab

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Mar 24, 2023
- demo · c86bcb5f
  Marek Ostaszewski authored 2 years ago
  
  c86bcb5f
Apr 05, 2022
- local refs removed · af6a2be4
  Marek Ostaszewski authored 3 years ago
  
  af6a2be4
- example updated based on the new code · 70e5077f
  Marek Ostaszewski authored 3 years ago
  
  70e5077f
Apr 04, 2022
- test for hipathia graph · e9c8f14d
  Marek Ostaszewski authored 3 years ago
  
  e9c8f14d
Mar 20, 2022
- dir creation correction · 20c61fa1
  Marek Ostaszewski authored 3 years ago
  
  20c61fa1
- source update · 038bd317
  Marek Ostaszewski authored 3 years ago
  
  038bd317
Mar 18, 2022
- Merge branch 'repo_update' of ssh://gitlab.lcsb.uni.lu:8022/covid/models into repo_update · 83398a6a
  Marek Ostaszewski authored 3 years ago
  
  83398a6a
- WikiPathways and Reactome added, code cleaned · c3b76e41
  Marek Ostaszewski authored 3 years ago
  
  c3b76e41
Mar 03, 2022
- Update models · 93e8ceef
  cylon-x authored 3 years ago
  
  93e8ceef
- Production/Consumption conditions reversed · 3fec7366
  Marek Ostaszewski authored 3 years ago
  
  3fec7366
Feb 25, 2022
- refreshed files · 7bb308d1
  Marek Ostaszewski authored 3 years ago
  
  7bb308d1
Feb 14, 2022
- Corrected target-source mixup · 18aa895f
  Marek Ostaszewski authored 3 years ago
  
  18aa895f
Feb 04, 2022
- expanded bipartite table and improved hipathia wrapper · fca4f8ea
  Marek Ostaszewski authored 3 years ago
  
  fca4f8ea
Feb 01, 2022
- A wrapper for hipathia converter from minerva diagrams · 4111b838
  Marek Ostaszewski authored 3 years ago
  
  4111b838
Jan 31, 2022
- added the computed bipartite with annotations · aaa1ecf1
  Marek Ostaszewski authored 3 years ago
  
  aaa1ecf1
- HGNC ids for human UPs · 32778a84
  Marek Ostaszewski authored 3 years ago
  
  32778a84
- Missing HGNC IDs · d8482019
  Marek Ostaszewski authored 3 years ago
  
  d8482019
Jan 28, 2022
- Crosslink table update - DEGRADED names are NA's, the crosslink_diagrams... · f40859eb
  Marek Ostaszewski authored 3 years ago
  
  Crosslink table update - DEGRADED names are NA's, the crosslink_diagrams function rewritten to dplyr
  f40859eb
Jan 27, 2022
- Corrections in the bipartite files · 323c94e6
  Marek Ostaszewski authored 3 years ago
  
  323c94e6
Jan 20, 2022
- Updated code, pushed files · e129d4e1
  Marek Ostaszewski authored 3 years ago
  
  e129d4e1
Jan 10, 2022
- code to put all interactors together · 0befb8d6
  Marek Ostaszewski authored 3 years ago
  
  0befb8d6
Dec 06, 2021
- diagram harmonisation, UniProt identifiers · d4879445
  Marek Ostaszewski authored 3 years ago
  
  d4879445
Sep 30, 2021
- complex portal ids added · c8c5b579
  Marek Ostaszewski authored 3 years ago
  
  c8c5b579
Sep 28, 2021
- Complex Portal mapping file · 2fcd39aa
  Marek Ostaszewski authored 3 years ago
  
  2fcd39aa
- New maps, new integration code · 233c010b
  Marek Ostaszewski authored 3 years ago
  
  233c010b
- Merge remote-tracking branch 'origin/master' into repo_update · 48b4fd60
  Marek Ostaszewski authored 3 years ago
  
  48b4fd60
Jul 28, 2021
- data processing scripts by Stephane · 017b15d8
  Marek Ostaszewski authored 3 years ago
  
  017b15d8
Jul 08, 2021
- Merge branch 'repo_update' into 'master' · 5f21665d
  Marek Ostaszewski authored 3 years ago
  
  Update map_groups.json See merge request !306
  5f21665d
- Merge branch 'repo_update' of ssh://git-r3lab-server.uni.lu:8022/covid/models into repo_update · 9a3b5434
  Marek Ostaszewski authored 3 years ago
  
  9a3b5434
- updated crosstalk file · c0939a58
  Marek Ostaszewski authored 3 years ago
  
  c0939a58
- Update models · b487858a
  cylon-x authored 3 years ago
  
  b487858a
- Update map_groups.json · e9ae9613
  Marek Ostaszewski authored 3 years ago
  
  e9ae9613
Jun 29, 2021
- Merge branch 'repo_update' into 'master' · 2bb2e901
  Marek Ostaszewski authored 3 years ago
  
  Repo update See merge request !305
  2bb2e901
- Dataset normalisation with HiPathia · f11162e7
  Marek Ostaszewski authored 3 years ago
  
  f11162e7
- SC analysis files · 86c4bf30
  Marek Ostaszewski authored 3 years ago
  
  86c4bf30
Jun 26, 2021
- Merge branch 'repo_update' into 'master' · 8e876051
  Marek Ostaszewski authored 3 years ago
  
  SC analysis See merge request !304
  8e876051
- SC analysis · d8e28a1b
  Marek Ostaszewski authored 3 years ago
  
  d8e28a1b
Jun 15, 2021
- Merge branch 'check-for-fairdom' into 'master' · 707a6f98
  Marek Ostaszewski authored 3 years ago
  
  FH images updated See merge request !303
  707a6f98
- Update models · ec4bc8fb
  cylon-x authored 3 years ago
  
  ec4bc8fb
- kinetics of reactions bind_E3_Orf10_subs and bind_E3_subs corrected, s338 used... · 606355a9
  Ewa Smula authored 3 years ago
  
  kinetics of reactions bind_E3_Orf10_subs and bind_E3_subs corrected, s338 used instead of ubit_target
  606355a9