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Name Last commit Last update
.ci
Curation
EUvsVirus
Executable Modules
Integration
Resources
WikiPathways
.gitignore
.gitlab-ci.yml
LICENSE
Readme.md
Readme.md

COVID-19 models

This repository is to share models and code for the analysis of COVID-19/SARS-CoV-2 mechanisms.

  • Curation folder contains models curated in CellDesigner, Newt and SBGN-ED
  • Integration folder contains the workflow for building a single map from multiple modules
  • EUvsVirus folder contains our code, data and models developed during the EUvsVirus hackathon
  • Executable models folder contains Boolean models of COVID-19 curated diagrams generated with CaSQ
  • WikiPathways folder contains a list of key COVID19 pathways on the WikiPathways platform, a dedicated collection here. Also, the folder contains examples of conversion of WikiPathways GPML to CellDesigner

See the COVID-19 Disease Map project website for more information.