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Commit 1fe799dd authored by Emma Schymanski's avatar Emma Schymanski
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Updated S65 and added S115

Thanks to Peter Oswald for contributing / curating!
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......@@ -64,7 +64,7 @@ https://zenodo.org/records/3549477/files/UJICCSLIB_InChIKeys_21112019.txt S61 |
https://zenodo.org/records/3634963/files/NORMANEWS2_InChIKeys.txt S62 | NORMANEWS2 | NormaNEWS2: Retrospective Screening of New Emerging Contaminants "List of suspects provided by many contributors to NormaNEWS2, the second round of retrospective screening for emerging environmental contaminants via the NORMAN Early Warning System, collated by Kevin Thomas and colleagues at UQ. Dataset DOI: 10.5281/zenodo.3634963" https://doi.org/10.5281/zenodo.3634963 Prio|Expt|Lit yes med "Contains comments and fragment information, some literature references. High profile activity"
https://zenodo.org/records/3637630/files/S63_UBADWGW_Nov2019_InChIKeys.txt S63 | UBADWGW | Substances Detected in Drinking (DW) or Groundwater (GW) "A list of REACH registered substances (Lists 5-7) detected in drinking (DW) or groundwater (GW) that do not meet PMT criteria, from the German Environmental Agency (UBA). Derived from a research project by Norwegian Geotechnical Institute (NGI). This couples with S36 UBAPMT (Lists 1-4) in the updated version provided by Hans Peter Arp, details in the technical note UBA Report 126/2019. Dataset DOI: 10.5281/zenodo.3637629" https://doi.org/10.5281/zenodo.3637630 Water|Reg|Expt yes med-high "PMT data, classifications, related to other lists contact to collaborator"
https://zenodo.org/records/3695174/files/S64_NaToxAq_InChIKeys_03032020.txt S64 | NATOXAQ | NaToxAq: Natural Toxins and Drinking Water Quality - From Source to Tap "NaToxAq (https://natoxaq.ku.dk) is a European Training Network (ETN) funded by the European Union's Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No 722493, to produce knowledge about natural toxins in aquatic environments. This is a list of all NaToxAq chemicals registered in MassBank within the project, provided by Tobias Schulze, UFZ. Dataset DOI: 10.5281/zenodo.3695174" https://doi.org/10.5281/zenodo.3695174 Water|Toxins|NP no low Structures only
https://zenodo.org/records/3753372/files/S65_UoA_GCHRMSTargets_InChIKeys.txt S65 | UATHTARGETSGC | University of Athens GC-HRMS Target List A list of targets (reference standards) for gas chromatography-atmospheric pressure chemical ionisation-high resolution mass spectrometry (GC-APCI-HRMS) from the University of Athens. Provided by the research group of Prof. Nikolaos Thomaidis. Dataset DOI: 10.5281/zenodo.3753372 https://doi.org/10.5281/zenodo.3753372 Stds GC low Structures only
https://zenodo.org/records/10697936/files/S65_UoAGCHRMSTargetList_InChIKeys.txt S65 | UATHTARGETSGC | University of Athens GC-HRMS Target List A list of targets (reference standards) for gas chromatography-atmospheric pressure chemical ionisation-high resolution mass spectrometry (GC-APCI-HRMS) from the University of Athens. Provided by the research group of Prof. Nikolaos Thomaidis. Dataset DOI: 10.5281/zenodo.3753372 https://doi.org/10.5281/zenodo.3753372 Stds GC low Structures only
https://zenodo.org/records/10628455/files/EawagTPandParents_InChIKeys.txt S66 | EAWAGTPS | Parent-Transformation Product Pairs from Eawag "Parent-Transformation Product Pairs of various micropollutants from Eawag: Swiss Federal Institute for Aquatic Science and Technology (https://www.eawag.ch/en/), described in Schollee et al 2017 DOI:10.1007/s13361-017-1797-6. Dataset DOI: 10.5281/zenodo.3754448" https://doi.org/10.5281/zenodo.3754448 TPs yes done Done
https://zenodo.org/records/3779849/files/TBUTYLPHENOLS_InChIKeys.txt S67 | TBUTYLPHENOLS | List of tert-butyl phenols from KEMI "A list of tert-butyl phenols from KEMI (Swedish Chemicals Agency), partner list to BISPHENOLS. Includes exposure score. Dataset DOI: 10.5281/zenodo.3779848" https://doi.org/10.5281/zenodo.3779849 Plastics|Exposure no low Structures and exposure scores
https://zenodo.org/records/10405484/files/S68_HSDBTPS_InChIKeys.txt S68 | HSDBTPS | Transformation Products Extracted from HSDB Content in PubChem "HSDBTPS is a list of metabolites / transformation products extracted from the ""Metabolites/Metabolism"" section from HSDB (Hazardous Substance Data Bank) in PubChem (https://pubchem.ncbi.nlm.nih.gov/source/11933). Dataset DOI: 10.5281/zenodo.3827487" https://doi.org/10.5281/zenodo.3827487 TPs coming done Done
......@@ -113,3 +113,4 @@ https://zenodo.org/records/8417075/files/PMTPFAS_InChIKey.txt S111 | PMTPFAS | F
https://zenodo.org/records/10551195/files/S112_FCCMIGEX_InChiKey.txt S112 | FCCMIGEX | List of Migrating & Extractable Food Contact Chemicals (FCCmigex) by FPF "List of migrating and extractable food contact chemicals (FCCmigex) systematically compiled as a database using information from over 1300 studies under the ongoing Food Contact Chemicals and Human Health (FCCH) Project led by the Food Packaging Forum. A peer-reviewed, open-access article (Geueke et al. 2023, DOI: https://doi.org/10.1080/10408398.2022.2067828) contains detailed information about compilation of the FCCmigex database which includes more than 4,000 food contact chemicals and over 24,000 database entries, browseable at https://www.foodpackagingforum.org/fccmigex. The list was kindly provided by Birgit Geueke & Lindsey Parkinson (Food Packaging Forum Foundation, Zurich, Switzerland). Dataset DOI: 10.5281/zenodo.10551194" https://doi.org/10.5281/zenodo.10551194 Food no med
https://zenodo.org/records/10501044/files/SWISSPHARMA24_InChIKeys.txt S113 | SWISSPHARMA24 | 2024 Swiss Pharmaceutical List with Metabolites "A list of 268 pharmaceuticals compiled based on Swiss use data, complemented with 1546 metabolites based on literature search. Provided by Corina Meyer, Eawag, Switzerland. Dataset DOI: 10.5281/zenodo.10501043" https://doi.org/10.5281/zenodo.10501043 Pharma|TPs yes med lots of TPs
https://zenodo.org/records/10611137/files/S114_SLUAMTPS_InChIKeys.txt S114 | SLUAMTPS | Antimicrobial Transformation Products from SLU "A list of 3500 antimicrobial transformation products (TPs) based on a current list of registered antibiotics, several prediction mechanisms and the Loeffler et al. 2023 review findings (DOI:10.1021/acs.est.2c09854). Contributed by Paul Loeffler, SLU. Dataset DOI: 10.5281/zenodo.10611136" https://doi.org/10.5281/zenodo.10611136 Pest|TPs yes med lots of TPs
https://zenodo.org/records/10695960/files/S115_EIEQSDWLGC_InChIKey.txt S115 | EIEQSDWLGC | EQS Directive and Watch List for GC from Environmental Institute "A list of 119 GC amenable compounds from the EQS Directive (2013/39/EU) and its proposed update (COM(2022) 540 final), including those listed in the last two versions of the Watch List (CID (EU) 2022/1307 and the proposal of the 5th Watch List as of January 2024). Kindly provided by Peter Oswald, EI. Dataset DOI: 10.5281/zenodo.10695959" https://doi.org/10.5281/zenodo.10695959 Prio|GC no low
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......@@ -66,7 +66,7 @@ https://zenodo.org/records/3966751/files/TableS1_CCS_RT_mz_DB_IUPA_charge.csv S6
https://zenodo.org/records/3634963/files/NORMANEWS2_Final.csv S62_NORMANEWS2 S62.0.1.0 3-Feb-20 10.5281/zenodo.3634963 https://www.norman-network.com/nds/SLE/ SMILES InChIKey Name|ShortName|CAS TRUE
https://zenodo.org/records/3637630/files/S63_UBADWGW_Nov2019.csv S63_UBADWGW S63.0.1.0 4-Feb-20 10.5281/zenodo.3637630 https://www.norman-network.com/nds/SLE/ SMILES_Largest_Fragment_Open_Babel InChIKey_largestFragment REACH_EC_List_Number|CAS_Number|Name UBA Report 126/2019 FALSE
https://zenodo.org/records/3695174/files/S64_NaToxAq_natural_toxins_in_MassBank.csv S64_NATOXAQ S64.0.1.0 3-Mar-20 10.5281/zenodo.3695174 https://www.norman-network.com/nds/SLE/ SMILES InChIKey NAME|CAS_RN https://natoxaq.ku.dk/ TRUE
https://zenodo.org/records/3753372/files/UoAthens_GC-HRMS_TargetList.csv S65_UATHTARGETSGC S65.0.1.0 15-Apr-20 10.5281/zenodo.3753372 https://www.norman-network.com/nds/SLE/ SMILES StdInChIKey Name|CAS FALSE
https://zenodo.org/records/10697936/files/S65_UoAGCHRMSTargetList.csv S65_UATHTARGETSGC S65.0.1.1 23-Feb-24 10.5281/zenodo.3753372 https://www.norman-network.com/nds/SLE/ SMILES StdInChIKey Name|CAS_Registry_Number TRUE
https://zenodo.org/records/10628455/files/EawagTPandParents.csv S66_EAWAGTPS S66.0.1.4 7-Feb-24 10.5281/zenodo.3754448 https://www.norman-network.com/nds/SLE/ SMILES InChIKey Name|Synonym1|Synonym2|Abbr_Synonym 10.1007/s13361-017-1797-6 TRUE
https://zenodo.org/records/3779849/files/TBUTYLPHENOLS_May2020.csv S67_TBUTYLPHENOLS S67.0.1.0 1-May-20 10.5281/zenodo.3779849 https://www.norman-network.com/nds/SLE/ SMILES INCHIKEY PREFERRED_NAME|IUPAC_NAME|CASRN FALSE
https://zenodo.org/records/10405484/files/S68_HSDBTPS_StructureInfoOnly.csv S68_HSDBTPS S68.0.8.0 19-Dec-23 10.5281/zenodo.3827487 https://www.norman-network.com/nds/SLE/ SMILES InChIKey Name|Synonym|Synonym2 TRUE
......@@ -115,4 +115,5 @@ https://zenodo.org/records/8417075/files/PMTPFAS.csv S111_PMTPFAS S111.0.1.0 7-O
https://zenodo.org/records/10551195/files/S112_FCCMIGEX.csv S112_FCCMIGEX S112.0.1.0 22-Jan-24 10.5281/zenodo.10551194 https://www.norman-network.com/nds/SLE/ SMILES InChIKey InChI Common_Name|Preferred_Name|CAS 10.1080/10408398.2022.2067828 TRUE
https://zenodo.org/records/10501044/files/S113_SWISSPHARMA24.csv S113_SWISSPHARMA24 S113.0.1.0 13-Jan-24 10.5281/zenodo.10501043 https://www.norman-network.com/nds/SLE/ SMILES InChIKey InChI CompoundName|CASRN TRUE
https://zenodo.org/records/10611137/files/S114_SLUAMTPS_substance.csv S114_SLUAMTPS S114.0.1.0 2-Feb-24 10.5281/zenodo.10611136 https://www.norman-network.com/nds/SLE/ SMILES InChIKey InChI IUPAC_Name 10.1021/acs.est.2c09854 FALSE
https://zenodo.org/records/10695960/files/S115_EIEQSDWLGC.csv S115_EIEQSDWLGC S115.0.1.0 23-Feb-24 10.5281/zenodo.10695959 https://www.norman-network.com/nds/SLE/ SMILES InChIKey InChI Substance name|IUPAC_Name FALSE
https://zenodo.org/records/10510477/files/susdat_2024-01-12-082351_ed.csv S0_SUSDAT S0.0.5.1 14-Jan-24 10.5281/zenodo.2664077 https://www.norman-network.com/nds/SLE/ Norman_SusDat_ID SMILES StdInChIKey Norman_SusDat_ID TRUE "adding NORMAN_SusDat_ID as requested by collaborator, correct SMILES, IK fields verified by Nikiforos. Omitted Name or other cols to avoid issues"
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