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Commit a1c5cde5 authored by Sonali Arora's avatar Sonali Arora
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modify to new biocViews to DESCRIPTION file


git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/RMassBank@87035 bc3139a8-67e5-0310-9ffc-ced21a209358
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Package: RMassBank Package: RMassBank
Type: Package Type: Package
Title: Workflow to process tandem MS files and build MassBank records Title: Workflow to process tandem MS files and build MassBank records
Version: 1.5.0 Version: 1.5.1
Authors@R: c( Authors@R: c( person(given = "RMassBank at Eawag", email =
person(given = "RMassBank at Eawag", email = "massbank@eawag.ch", "massbank@eawag.ch", role=c("cre")), person(given = "Michael
role=c("cre")), A.", family = "Stravs", email = "michael.stravs@eawag.ch",
person(given = "Michael A.", family = "Stravs", email = role=c("aut")), person(given = "Emma L.", family =
"michael.stravs@eawag.ch", role=c("aut")), person(given = "Emma L.", "Schymanski", email = "emma.schymanski@eawag.ch",
family = "Schymanski", email = "emma.schymanski@eawag.ch", role=c("aut")), role=c("aut")), person(given = "Steffen", family = "Neumann",
person(given = "Steffen", family = "Neumann", role = "aut", email = role = "aut", email = "sneumann@ipb-halle.de"), person(given =
"sneumann@ipb-halle.de"), person(given = "Erik", family = "Muller", role = "Erik", family = "Muller", role = "aut", email =
"aut", email = "erik.mueller@student.uni-halle.de"), person(given = "erik.mueller@student.uni-halle.de"), person(given = "Tobias",
"Tobias", family = "Schulze", role = "ctb", email = family = "Schulze", role = "ctb", email =
"tobias.schulze@ufz.de") ) "tobias.schulze@ufz.de") )
Author: Michael Stravs, Emma Schymanski, Steffen Neumann, Erik Mueller, with Author: Michael Stravs, Emma Schymanski, Steffen Neumann, Erik Mueller,
contributions from Tobias Schulze with contributions from Tobias Schulze
Maintainer: RMassBank at Eawag <massbank@eawag.ch> Maintainer: RMassBank at Eawag <massbank@eawag.ch>
Description: Workflow to process tandem MS files and build MassBank records. Description: Workflow to process tandem MS files and build MassBank
Functions include automated extraction of tandem MS spectra, formula records. Functions include automated extraction of tandem MS
assignment to tandem MS fragments, recalibration of tandem MS spectra with spectra, formula assignment to tandem MS fragments,
assigned fragments, spectrum cleanup, automated retrieval of compound recalibration of tandem MS spectra with assigned fragments,
information from Internet databases, and export to MassBank records. spectrum cleanup, automated retrieval of compound information
License: Artistic-2.0 from Internet databases, and export to MassBank records.
SystemRequirements: OpenBabel License: Artistic-2.0
biocViews: Bioinformatics, MassSpectrometry, Metabolomics, Software SystemRequirements: OpenBabel
Depends: Depends: mzR,rcdk,yaml,methods
mzR,rcdk,yaml,methods Imports: XML,RCurl,rjson
Imports: Suggests: gplots,RMassBankData, xcms (>= 1.37.1), CAMERA, ontoCAT,
XML,RCurl,rjson RUnit
Suggests: Collate: 'createMassBank.R' 'formulaCalculator.R' 'leCsvAccess.R'
gplots,RMassBankData, 'leMsMs.r' 'leMsmsRaw.R' 'settings_example.R' 'webAccess.R'
xcms (>= 1.37.1), 'deprofile.R' 'parseMassBank.R' 'RmbWorkspace.R'
CAMERA, 'validateMassBank.R' 'zzz.R' 'tools.R'
ontoCAT, biocViews: MassSpectrometry, Metabolomics, Software
RUnit
Collate:
'createMassBank.R'
'formulaCalculator.R'
'leCsvAccess.R'
'leMsMs.r'
'leMsmsRaw.R'
'settings_example.R'
'webAccess.R'
'deprofile.R'
'parseMassBank.R'
'RmbWorkspace.R'
'validateMassBank.R'
'zzz.R'
'tools.R'
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