Commits · 2768785751c9f12ce54bb4a172461530507019a5 · Environmental Cheminformatics / RMassBank_by_MaliRemorker

This project is mirrored from https://github.com/MaliRemorker/RMassBank. Pull mirroring failed 1 year ago.
Repository mirroring has been paused due to too many failed attempts. It can be resumed by a project maintainer or owner.
Last successful update 1 year ago.

Jun 04, 2015
- some export etc. fixes so the package builds, at least using devtools :P · 27687857
  michele authored 9 years ago
  
  27687857
Jan 28, 2015
- Fixed return value (analyzeMsMs.formula) · e4513d03
  Michele Stravs authored 10 years ago
  
  e4513d03
Jan 27, 2015
- Ported analyzeMsMsHR.formula analyzeTandemShot() to new data format · c202245a
  Michele Stravs authored 10 years ago
  
  c202245a
- (and again) · f128bae2
  Michele Stravs authored 10 years ago
  
  f128bae2
- Added mode to RmbSpectraSet · db2477d4
  Michele Stravs authored 10 years ago
  
  db2477d4
Dec 04, 2014
- msmsWorkspace update: specs and analyzedSpecs to spectra · 2f74bd54
  Michele Stravs authored 10 years ago
  
  2f74bd54
- header cache fix findMsMsHR.ticms2 · 017f6132
  Michele Stravs authored 10 years ago
  
  017f6132
Nov 10, 2014

adapted the findMsMsHR functions to produce RmbSpectraSet items. Also added... · 498bbbfa

Michele Stravs authored 10 years ago

adapted the findMsMsHR functions to produce RmbSpectraSet items. Also added support for a floating recalibration at EIC extraction stage (has nothing to do with the refactoring)

498bbbfa

MSnbase-based RmbSpectrum2 class (currently requires MSnbase but for final... · 4107e442

Michele Stravs authored 10 years ago

MSnbase-based RmbSpectrum2 class (currently requires MSnbase but for final commit will fork the base classes)
RmbSpectraSet which will be the class for the workspace@spectra slot
TODO: maybe implement S4Vector? Does that even work?

4107e442

Jun 20, 2014
- Merge pull request #85 from sneumann/master · a2fd7cf7
  meowcat authored 10 years ago
  
  Please pull our latest additions
  a2fd7cf7
Jun 16, 2014
- Merge branch 'master' of https://github.com/meowcat/RMassBank · 8b2fc462
  Steffen Neumann authored 10 years ago
  
  8b2fc462
May 26, 2014
- Fixed double byte character · 8e7eedca
  ermueller authored 10 years ago
  
  8e7eedca
May 08, 2014
- renamed argument name in function call · 978a3f08
  Steffen Neumann authored 10 years ago
  
  978a3f08
- mM fucntionality and error messages for wrong mode added · 4690d53f
  ermueller authored 10 years ago
  
  4690d53f
- Changed the error message for giving a nonexisting option-path · cfada9cc
  ermueller authored 10 years ago
  
  cfada9cc
- Added Micheles Extensions for mzR-MSMS · f49cfa85
  ermueller authored 10 years ago
  
  f49cfa85
Apr 30, 2014
- Added missing mM-mode compatibility for several functions · b099dd31
  ermueller authored 10 years ago
  
  b099dd31
Apr 29, 2014
- check the supplied mode and complain if not matched, and added mM. Closes #81 · ae4b915f
  Steffen Neumann authored 10 years ago
  
  ae4b915f
Apr 27, 2014
- Merge pull request #76 from sneumann/master · 6c263918
  meowcat authored 10 years ago
  
  Please pull our changes
  6c263918
Apr 24, 2014
- fix a merge conflict (version number and line break in vignette) · 2b8452be
  Steffen Neumann authored 10 years ago
  
  2b8452be
Apr 23, 2014
- Removed a superfluous normalizepath · c1b8078e
  ermueller authored 10 years ago
  
  c1b8078e
Apr 22, 2014
- Merge https://github.com/sneumann/RMassBank into bioc2014 · eaada790
  ermueller authored 10 years ago
  
  eaada790
- Fixed several small issues · 6ded55c0
  ermueller authored 10 years ago
  
  6ded55c0
Apr 07, 2014
- Also write out the filename which is not found. Closes #37 · 3ac3e1c4
  Steffen Neumann authored 10 years ago
  
  3ac3e1c4
- bump version before pushing to github · a0088847
  Steffen Neumann authored 10 years ago
  
  a0088847
Apr 06, 2014
- Loadlist now also accepts semicolon-separated tables · 8f15e26f
  ermueller authored 10 years ago
  
  8f15e26f
- A small merge problem fixed · 779f41f7
  ermueller authored 10 years ago
  
  779f41f7
- Fixed show and peaklist of msmsRead · 4db2620a
  ermueller authored 10 years ago
  
  4db2620a
Mar 27, 2014
- Update RMassBankXCMS.Rnw · 60725b05
  schymane authored 10 years ago
  
  Fixed minor errors, reordered 3.3 and 3.4 to avoid confusion, mentioned msmsRead.
  60725b05
- Merge remote-tracking branch 'origin/HEAD' · 3ad15f07
  michele authored 10 years ago
  
  3ad15f07
- Fix electronic noise removal in workflow · 9d5b7969
  michele authored 10 years ago
  
  9d5b7969
- Merge pull request #68 from sneumann/master · d58b5b15
  meowcat authored 10 years ago
  
  Please pull these fixes, which enable peak list input, and bump version to 1.5.2
  d58b5b15
Mar 26, 2014
- Enable the manual peaklist input example in the vignette, closes #67 · 9c3d30b2
  Steffen Neumann authored 10 years ago
  
  9c3d30b2
- Changed the vignette to make it more understandable, also fixed typos · f0927e27
  ermueller authored 10 years ago
  
  f0927e27
Mar 24, 2014
- Merge branch 'bioc2014' of https://github.com/ermueller/RMassBank · 9ab4abf7
  Steffen Neumann authored 11 years ago
  
  9ab4abf7
- Fixed the peaklist-workflow in msmsWorkflow · b758b736
  ermueller authored 11 years ago
  
  b758b736
Mar 11, 2014
- some re-indenting and line breaks, no code changes · 06a6dce4
  Steffen Neumann authored 11 years ago
  
  06a6dce4
- Merge pull request #66 from sneumann/master · e26d3f50
  meowcat authored 11 years ago
  
  Please pull our changes
  e26d3f50
- Eriks commit fixes the vignette. Closes #62 · 8e845edd
  Steffen Neumann authored 11 years ago
  
  8e845edd
Mar 10, 2014
- Merge branch 'bioc2014' of https://github.com/ermueller/RMassBank · e9de3bd5
  Steffen Neumann authored 11 years ago
  
  e9de3bd5