Initial commit

.gitignore

+_site
+.sass-cache
+.jekyll-metadata

404.html

+---
+layout: default
+---
+
+<style type="text/css" media="screen">
+  .container {
+    margin: 10px auto;
+    max-width: 600px;
+    text-align: center;
+  }
+  h1 {
+    margin: 30px 0;
+    font-size: 4em;
+    line-height: 1;
+    letter-spacing: -1px;
+  }
+</style>
+
+<div class="container">
+  <h1>404</h1>
+
+  <p><strong>Page not found :(</strong></p>
+  <p>The requested page could not be found.</p>
+</div>

Gemfile

+source "https://rubygems.org"
+ruby 2.5
+
+# Hello! This is where you manage which Jekyll version is used to run.
+# When you want to use a different version, change it below, save the
+# file and run `bundle install`. Run Jekyll with `bundle exec`, like so:
+#
+#     bundle exec jekyll serve
+#
+# This will help ensure the proper Jekyll version is running.
+# Happy Jekylling!
+gem "jekyll", "~> 3.7.3"
+gem "bundler", "~> 1.16.1"
+
+# This is the default theme for new Jekyll sites. You may change this to anything you like.
+gem "minima", "~> 2.0"
+gem 'jekyll-theme-primer', '~> 0.5.2'
+gem 'jekyll-theme-lcsb-default', :git => "ssh://git@git-r3lab-server.uni.lu:8022/core-services/jekyll-theme-lcsb-default.git", :branch => "master"
+
+# If you want to use GitHub Pages, remove the "gem "jekyll"" above and
+# uncomment the line below. To upgrade, run `bundle update github-pages`.
+# gem "github-pages", group: :jekyll_plugins
+
+# If you have any plugins, put them here!
+group :jekyll_plugins do
+  gem "jekyll-feed", "~> 0.6"
+end
+
+# Windows does not include zoneinfo files, so bundle the tzinfo-data gem
+gem "tzinfo-data", platforms: [:mingw, :mswin, :x64_mingw, :jruby]
+
+# Performance-booster for watching directories on Windows
+gem "wdm", "~> 0.1.0" if Gem.win_platform?
+

Gemfile.lock

+GIT
+  remote: ssh://git@git-r3lab-server.uni.lu:8022/core-services/jekyll-theme-lcsb-default.git
+  revision: 852e566edd26ac75be4bec07cd26dc44e0c6d4fe
+  branch: master
+  specs:
+    jekyll-theme-lcsb-default (0.1.0)
+      jekyll (~> 3.7)
+      jekyll-seo-tag (~> 2.1)
+
+GEM
+  remote: https://rubygems.org/
+  specs:
+    addressable (2.5.2)
+      public_suffix (>= 2.0.2, < 4.0)
+    colorator (1.1.0)
+    concurrent-ruby (1.0.5)
+    em-websocket (0.5.1)
+      eventmachine (>= 0.12.9)
+      http_parser.rb (~> 0.6.0)
+    eventmachine (1.2.5)
+    faraday (0.14.0)
+      multipart-post (>= 1.2, < 3)
+    ffi (1.9.23)
+    forwardable-extended (2.6.0)
+    http_parser.rb (0.6.0)
+    i18n (0.9.5)
+      concurrent-ruby (~> 1.0)
+    jekyll (3.7.3)
+      addressable (~> 2.4)
+      colorator (~> 1.0)
+      em-websocket (~> 0.5)
+      i18n (~> 0.7)
+      jekyll-sass-converter (~> 1.0)
+      jekyll-watch (~> 2.0)
+      kramdown (~> 1.14)
+      liquid (~> 4.0)
+      mercenary (~> 0.3.3)
+      pathutil (~> 0.9)
+      rouge (>= 1.7, < 4)
+      safe_yaml (~> 1.0)
+    jekyll-feed (0.9.3)
+      jekyll (~> 3.3)
+    jekyll-github-metadata (2.9.4)
+      jekyll (~> 3.1)
+      octokit (~> 4.0, != 4.4.0)
+    jekyll-sass-converter (1.5.2)
+      sass (~> 3.4)
+    jekyll-seo-tag (2.4.0)
+      jekyll (~> 3.3)
+    jekyll-theme-primer (0.5.2)
+      jekyll (~> 3.5)
+      jekyll-github-metadata (~> 2.9)
+      jekyll-seo-tag (~> 2.2)
+    jekyll-watch (2.0.0)
+      listen (~> 3.0)
+    kramdown (1.16.2)
+    liquid (4.0.0)
+    listen (3.1.5)
+      rb-fsevent (~> 0.9, >= 0.9.4)
+      rb-inotify (~> 0.9, >= 0.9.7)
+      ruby_dep (~> 1.2)
+    mercenary (0.3.6)
+    minima (2.4.0)
+      jekyll (~> 3.5)
+      jekyll-feed (~> 0.9)
+      jekyll-seo-tag (~> 2.1)
+    multipart-post (2.0.0)
+    octokit (4.8.0)
+      sawyer (~> 0.8.0, >= 0.5.3)
+    pathutil (0.16.1)
+      forwardable-extended (~> 2.6)
+    public_suffix (3.0.2)
+    rb-fsevent (0.10.3)
+    rb-inotify (0.9.10)
+      ffi (>= 0.5.0, < 2)
+    rouge (3.1.1)
+    ruby_dep (1.5.0)
+    safe_yaml (1.0.4)
+    sass (3.5.5)
+      sass-listen (~> 4.0.0)
+    sass-listen (4.0.0)
+      rb-fsevent (~> 0.9, >= 0.9.4)
+      rb-inotify (~> 0.9, >= 0.9.7)
+    sawyer (0.8.1)
+      addressable (>= 2.3.5, < 2.6)
+      faraday (~> 0.8, < 1.0)
+
+PLATFORMS
+  ruby
+
+DEPENDENCIES
+  bundler (~> 1.16.1)
+  jekyll (~> 3.7.3)
+  jekyll-feed (~> 0.6)
+  jekyll-theme-lcsb-default!
+  jekyll-theme-primer (~> 0.5.2)
+  minima (~> 2.0)
+  tzinfo-data
+
+RUBY VERSION
+   ruby 2.5.0p0
+
+BUNDLED WITH
+   1.16.1

_config.yml

+# Welcome to Jekyll!
+#
+# This config file is meant for settings that affect your whole blog, values
+# which you are expected to set up once and rarely edit after that. If you find
+# yourself editing this file very often, consider using Jekyll's data files
+# feature for the data you need to update frequently.
+#
+# For technical reasons, this file is *NOT* reloaded automatically when you use
+# 'bundle exec jekyll serve'. If you change this file, please restart the server process.
+
+# Site settings
+# These are used to personalize your new site. If you look in the HTML files,
+# you will see them accessed via {{ site.title }}, {{ site.email }}, and so on.
+# You can create any custom variable you would like, and they will be accessible
+# in the templates via {{ site.myvariable }}.
+title: This is Trefex
+email: your-email@example.com
+description: >- # this means to ignore newlines until "baseurl:"
+  Write an awesome description for your new site here. You can edit this
+  line in _config.yml. It will appear in your document head meta (for
+  Google search results) and in your feed.xml site description.
+baseurl: "" # the subpath of your site, e.g. /blog
+url: "" # the base hostname & protocol for your site, e.g. http://example.com
+twitter_username: jekyllrb
+github_username:  jekyll
+
+# Build settings
+markdown: kramdown
+theme: jekyll-theme-lcsb-default
+plugins:
+  - jekyll-feed
+
+# Exclude from processing.
+# The following items will not be processed, by default. Create a custom list
+# to override the default setting.
+# exclude:
+#   - Gemfile
+#   - Gemfile.lock
+#   - node_modules
+#   - vendor/bundle/
+#   - vendor/cache/
+#   - vendor/gems/
+#   - vendor/ruby/

_posts/2018-03-12-welcome-to-jekyll.markdown

+---
+layout: default
+title:  "Welcome to Jekyll!"
+date:   2018-03-12 17:03:38 +0100
+categories: jekyll update
+---
+You’ll find this post in your `_posts` directory. Go ahead and edit it and re-build the site to see your changes. You can rebuild the site in many different ways, but the most common way is to run `jekyll serve`, which launches a web server and auto-regenerates your site when a file is updated.
+
+To add new posts, simply add a file in the `_posts` directory that follows the convention `YYYY-MM-DD-name-of-post.ext` and includes the necessary front matter. Take a look at the source for this post to get an idea about how it works.
+
+Jekyll also offers powerful support for code snippets:
+
+{% highlight ruby %}
+def print_hi(name)
+  puts "Hi, #{name}"
+end
+print_hi('Tom')
+#=> prints 'Hi, Tom' to STDOUT.
+{% endhighlight %}
+
+Check out the [Jekyll docs][jekyll-docs] for more info on how to get the most out of Jekyll. File all bugs/feature requests at [Jekyll’s GitHub repo][jekyll-gh]. If you have questions, you can ask them on [Jekyll Talk][jekyll-talk].
+
+[jekyll-docs]: https://jekyllrb.com/docs/home
+[jekyll-gh]:   https://github.com/jekyll/jekyll
+[jekyll-talk]: https://talk.jekyllrb.com/

about.md

+---
+layout: page
+title: About
+permalink: /about/
+---
+
+This is the base Jekyll theme. You can find out more info about customizing your Jekyll theme, as well as basic Jekyll usage documentation at [jekyllrb.com](https://jekyllrb.com/)
+
+You can find the source code for Minima at GitHub:
+[jekyll][jekyll-organization] /
+[minima](https://github.com/jekyll/minima)
+
+You can find the source code for Jekyll at GitHub:
+[jekyll][jekyll-organization] /
+[jekyll](https://github.com/jekyll/jekyll)
+
+
+[jekyll-organization]: https://github.com/jekyll

index.md

+---
+# You don't need to edit this file, it's empty on purpose.
+# Edit theme's home layout instead if you wanna make some changes
+# See: https://jekyllrb.com/docs/themes/#overriding-theme-defaults
+layout: default
+---

toto.md

+---
+layout: page
+title: Trefex
+permalink: /tutu/
+---
+
+This is `cool` stuff.
\ No newline at end of file