Explore projects

Computational models of different aspects of COVID-19

Integrated meta-omics pipeline

STAR and DESeq2

An R package for generating chemical stripes from patent or literature data extracted from PubChem

Additional analyses for IMP manuscript

Template repository for writing a paper the R3 way.

ShinyTPs: Curate transformation products from text mining results from HSDB & PubChem

Code used for the analysis of the RNA-seq, ATAC-seq and ChIP-seq datasets produced in this study. Original fastq files deposited in https://ega-archive.org/, under the accession number EGAD00001009288.

LAO time series analyses

A project for interactions with PubChem

Pre-screening mass spectrometry data.

seesaw_code project, see details in:

GigaSOM.jl: Huge-scale, high-performance flow cytometry clustering in Julia.

Repository containing workflows for IMP3 downstream analyses Related project(s): NOMIS

Mouse microglia regional heterogeneity in single cell resolution

R code for an interface to MINERVA API and helper functions