protein modification has x,y coordinats instead of CellDesigner angle (1fe7ff92) · Commits · minerva / core

Commit 1fe7ff92 authored 6 years ago by Piotr Gawron

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protein modification has x,y coordinats instead of CellDesigner angle

parent bac4b5bb

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1 merge request!345Resolve "Genes annotations don't show"

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annotation/src/main/java/lcsb/mapviewer/annotation/services/ChemicalParser.java 4 additions, 0 deletions

...va/lcsb/mapviewer/annotation/services/ChemicalParser.java
commons/src/main/java/lcsb/mapviewer/common/comparator/StringSetComparator.java 48 additions, 48 deletions

...lcsb/mapviewer/common/comparator/StringSetComparator.java
commons/src/main/java/lcsb/mapviewer/common/geometry/LineTransformation.java 199 additions, 199 deletions

...va/lcsb/mapviewer/common/geometry/LineTransformation.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/geometry/AbstractCellDesignerAliasConverter.java 409 additions, 235 deletions

...designer/geometry/AbstractCellDesignerAliasConverter.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/geometry/CellDesignerAliasConverter.java 127 additions, 114 deletions

...del/celldesigner/geometry/CellDesignerAliasConverter.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/geometry/GeneCellDesignerAliasConverter.java 99 additions, 81 deletions

...celldesigner/geometry/GeneCellDesignerAliasConverter.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/geometry/ICellDesignerAliasConverter.java 64 additions, 61 deletions

...el/celldesigner/geometry/ICellDesignerAliasConverter.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/geometry/IonCellDesignerAliasConverter.java 101 additions, 82 deletions

.../celldesigner/geometry/IonCellDesignerAliasConverter.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/geometry/SimpleMoleculeCellDesignerAliasConverter.java 62 additions, 43 deletions

...er/geometry/SimpleMoleculeCellDesignerAliasConverter.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/geometry/UnknownCellDesignerAliasConverter.java 73 additions, 54 deletions

...ldesigner/geometry/UnknownCellDesignerAliasConverter.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/species/GeneXmlParser.java 128 additions, 125 deletions

...r/converter/model/celldesigner/species/GeneXmlParser.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/species/ProteinXmlParser.java 149 additions, 146 deletions

...onverter/model/celldesigner/species/ProteinXmlParser.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerGene.java 106 additions, 99 deletions

...verter/model/celldesigner/structure/CellDesignerGene.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerIon.java 51 additions, 52 deletions

...nverter/model/celldesigner/structure/CellDesignerIon.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerProtein.java 159 additions, 153 deletions

...ter/model/celldesigner/structure/CellDesignerProtein.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/fields/CellDesignerModificationResidue.java 14 additions, 5 deletions

...ner/structure/fields/CellDesignerModificationResidue.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/geometry/AbstractCellDesignerAliasConverterTest.java 51 additions, 48 deletions

...gner/geometry/AbstractCellDesignerAliasConverterTest.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/geometry/GeneCellDesignerAliasConverterTest.java 74 additions, 75 deletions

...designer/geometry/GeneCellDesignerAliasConverterTest.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/geometry/IonCellDesignerAliasConverterTest.java 56 additions, 57 deletions

...ldesigner/geometry/IonCellDesignerAliasConverterTest.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/geometry/ProteinConverterTest.java 96 additions, 50 deletions

...ter/model/celldesigner/geometry/ProteinConverterTest.java

with 2070 additions and 1727 deletions

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