unit test for searching in submaps added

frontend-js/src/test/js/map/overlay/SearchDbOverlay-test.js

@@ -70,6 +70,18 @@ describe('SearchDbOverlay', function () {
         return Promise.all(promises);
       });
     });
+    it("on submap", function () {
+      helper.setUrl("http://localhost/?id=complex_model_with_submaps")
+      return ServerConnector.getProject().then(function (project) {
+        var map = helper.createCustomMap(project);
+        var searchDb = helper.createSearchDbOverlay(map);
+        return searchDb.searchByQuery("s1", true);
+      }).then(function (result) {
+        assert.equal(result.length, 1);
+        assert.equal(result[0].length, 3);
+      });
+    });
+
   });
 
   describe("searchByEncodedQuery", function () {

frontend-js/testFiles/apiCalls/projects/complex_model_with_submaps/models/all/bioEntities.search/count=100&perfectMatch=true&query=s1&token=MOCK_TOKEN_ID&

+[{"id":345331,"modelId":16728,"type":"ALIAS"},{"id":345337,"modelId":16731,"type":"ALIAS"},{"id":345330,"modelId":16729,"type":"ALIAS"}]
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frontend-js/testFiles/apiCalls/projects/complex_model_with_submaps/models/all/bioEntities/elements/columns=id,bounds,modelId&id=345339&token=MOCK_TOKEN_ID&

+[{"bounds":{"height":30.0,"width":80.0,"x":257.0,"y":254.0},"id":345339,"modelId":16728}]
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frontend-js/testFiles/apiCalls/projects/complex_model_with_submaps/models/all/bioEntities/elements/id=345330&token=MOCK_TOKEN_ID&

+[{"abbreviation":null,"boundaryCondition":false,"bounds":{"height":40.0,"width":80.0,"x":65.0,"y":64.0},"compartmentId":null,"complexId":null,"constant":false,"elementId":"sa1","formerSymbols":[],"formula":null,"fullName":null,"hierarchyVisibilityLevel":"0","id":345330,"initialAmount":0.0,"initialConcentration":null,"linkedSubmodel":16730,"modelId":16729,"name":"s1","notes":"","other":{"modifications":[],"structuralState":null,"structures":{}},"references":[],"symbol":null,"synonyms":[],"type":"Protein"}]
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frontend-js/testFiles/apiCalls/projects/complex_model_with_submaps/models/all/bioEntities/elements/id=345331&token=MOCK_TOKEN_ID&

+[{"abbreviation":null,"boundaryCondition":false,"bounds":{"height":40.0,"width":80.0,"x":59.0,"y":73.0},"compartmentId":345323,"complexId":null,"constant":false,"elementId":"sa1","formerSymbols":[],"formula":null,"fullName":null,"hierarchyVisibilityLevel":"2","id":345331,"initialAmount":0.0,"initialConcentration":null,"linkedSubmodel":16729,"modelId":16728,"name":"s1","notes":"","other":{"modifications":[],"structuralState":null,"structures":{}},"references":[],"symbol":null,"synonyms":[],"type":"Protein"}]
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frontend-js/testFiles/apiCalls/projects/complex_model_with_submaps/models/all/bioEntities/elements/id=345337&token=MOCK_TOKEN_ID&

+[{"abbreviation":null,"boundaryCondition":false,"bounds":{"height":40.0,"width":80.0,"x":190.0,"y":44.0},"compartmentId":null,"complexId":null,"constant":false,"elementId":"sa1","formerSymbols":[],"formula":null,"fullName":null,"hierarchyVisibilityLevel":"0","id":345337,"initialAmount":0.0,"initialConcentration":null,"linkedSubmodel":null,"modelId":16731,"name":"s1","notes":"","other":{"modifications":[],"structuralState":null,"structures":{}},"references":[],"symbol":null,"synonyms":[],"type":"Protein"}]
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frontend-js/testFiles/apiCalls/projects/sample/miRnas.search/query=hsa-miR-125a-3p&token=MOCK_TOKEN_ID&

-[{"id":"hsa-miR-125a-3p","name":"hsa-miR-125a-3p","targets":[{"name":"FYN","references":[{"annotatorClassName":"","article":{"title":"microRNA-125a-3p reduces cell proliferation and migration by targeting Fyn.","authors":["Ninio-Many L"," Grossman H"," Shomron N"," Chuderland D"," Shalgi R."],"journal":"Journal of cell science","year":2013,"link":"http://www.ncbi.nlm.nih.gov/pubmed/23606749","id":"23606749","citationCount":25,"stringAuthors":"Ninio-Many L,  Grossman H,  Shomron N,  Chuderland D,  Shalgi R."},"descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.ncbi.nlm.nih.gov/pubmed/23606749","resource":"23606749","type":"PUBMED"}],"targetElements":[],"targetParticipants":[{"annotatorClassName":"","descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.genenames.org/cgi-bin/gene_symbol_report?match=FYN","resource":"FYN","type":"HGNC_SYMBOL"}]},{"name":"GPC4","references":[{"annotatorClassName":"","article":{"title":"MicroRNA-125a inhibits cell growth by targeting glypican-4.","authors":["Feng C"," Li J"," Ruan J"," Ding K."],"journal":"Glycoconjugate journal","year":2012,"link":"http://www.ncbi.nlm.nih.gov/pubmed/22644326","id":"22644326","citationCount":8,"stringAuthors":"Feng C,  Li J,  Ruan J,  Ding K."},"descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.ncbi.nlm.nih.gov/pubmed/22644326","resource":"22644326","type":"PUBMED"}],"targetElements":[],"targetParticipants":[{"annotatorClassName":"","descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.genenames.org/cgi-bin/gene_symbol_report?match=GPC4","resource":"GPC4","type":"HGNC_SYMBOL"}]},{"name":"RHOA","references":[{"annotatorClassName":"","article":{"title":"MiRNA-125a-3p is a negative regulator of the RhoA-actomyosin pathway in A549 cells.","authors":["Huang B"," Luo W"," Sun L"," Zhang Q"," Jiang L"," Chang J"," Qiu X"," Wang E."],"journal":"International journal of oncology","year":2013,"link":"http://www.ncbi.nlm.nih.gov/pubmed/23525486","id":"23525486","citationCount":8,"stringAuthors":"Huang B,  Luo W,  Sun L,  Zhang Q,  Jiang L,  Chang J,  Qiu X,  Wang E."},"descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.ncbi.nlm.nih.gov/pubmed/23525486","resource":"23525486","type":"PUBMED"}],"targetElements":[],"targetParticipants":[{"annotatorClassName":"","descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.genenames.org/cgi-bin/gene_symbol_report?match=RHOA","resource":"RHOA","type":"HGNC_SYMBOL"}]}]}]
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+[{"id":"hsa-miR-125a-3p","name":"hsa-miR-125a-3p","targets":[{"name":"FYN","references":[{"annotatorClassName":"","article":{"title":"microRNA-125a-3p reduces cell proliferation and migration by targeting Fyn.","authors":["Ninio-Many L"," Grossman H"," Shomron N"," Chuderland D"," Shalgi R."],"journal":"Journal of cell science","year":2013,"link":"http://www.ncbi.nlm.nih.gov/pubmed/23606749","id":"23606749","citationCount":18,"stringAuthors":"Ninio-Many L,  Grossman H,  Shomron N,  Chuderland D,  Shalgi R."},"descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.ncbi.nlm.nih.gov/pubmed/23606749","resource":"23606749","type":"PUBMED"}],"targetElements":[],"targetParticipants":[{"annotatorClassName":"","descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.genenames.org/cgi-bin/gene_symbol_report?match=FYN","resource":"FYN","type":"HGNC_SYMBOL"}]},{"name":"GPC4","references":[{"annotatorClassName":"","article":{"title":"MicroRNA-125a inhibits cell growth by targeting glypican-4.","authors":["Feng C"," Li J"," Ruan J"," Ding K."],"journal":"Glycoconjugate journal","year":2012,"link":"http://www.ncbi.nlm.nih.gov/pubmed/22644326","id":"22644326","citationCount":8,"stringAuthors":"Feng C,  Li J,  Ruan J,  Ding K."},"descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.ncbi.nlm.nih.gov/pubmed/22644326","resource":"22644326","type":"PUBMED"}],"targetElements":[],"targetParticipants":[{"annotatorClassName":"","descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.genenames.org/cgi-bin/gene_symbol_report?match=GPC4","resource":"GPC4","type":"HGNC_SYMBOL"}]},{"name":"RHOA","references":[{"annotatorClassName":"","article":{"title":"MiRNA-125a-3p is a negative regulator of the RhoA-actomyosin pathway in A549 cells.","authors":["Huang B"," Luo W"," Sun L"," Zhang Q"," Jiang L"," Chang J"," Qiu X"," Wang E."],"journal":"International journal of oncology","year":2013,"link":"http://www.ncbi.nlm.nih.gov/pubmed/23525486","id":"23525486","citationCount":8,"stringAuthors":"Huang B,  Luo W,  Sun L,  Zhang Q,  Jiang L,  Chang J,  Qiu X,  Wang E."},"descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.ncbi.nlm.nih.gov/pubmed/23525486","resource":"23525486","type":"PUBMED"}],"targetElements":[],"targetParticipants":[{"annotatorClassName":"","descriptionByType":"","descriptionByTypeRelation":"","id":0,"link":"http://www.genenames.org/cgi-bin/gene_symbol_report?match=RHOA","resource":"RHOA","type":"HGNC_SYMBOL"}]}]}]
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