logging in pathvisio module fixed

pathvisio/src/test/resources/log4j.properties

-#Set root logger 's level and its appender to an appender called CONSOLE which is defined below.
-log4j.rootLogger=info, CONSOLE, R
-
-#Set the behavior of the CONSOLE appender 
-log4j.appender.CONSOLE=org.apache.log4j.ConsoleAppender
-log4j.appender.CONSOLE.layout=org.apache.log4j.PatternLayout
-log4j.appender.CONSOLE.layout.ConversionPattern=%d %5p [%t] (%F:%L) - %m%n
-#log4j.appender.CONSOLE.layout.ConversionPattern=%m%n
-
-
-#Set the behavior of the FILE appender 
-log4j.appender.R=org.apache.log4j.FileAppender
-log4j.appender.R.File=MapViewer.log
-log4j.appender.R.layout=org.apache.log4j.PatternLayout
-log4j.appender.R.layout.ConversionPattern=%d %5p [%t] (%F:%L) - %m%n
-
-
-log4j.logger.org.springframework=warn
-log4j.logger.org.hibernate=warn
-log4j.logger.lcsb=debug
-#log4j.logger.lcsb.mapviewer.model=info
-#log4j.logger.lcsb.mapviewer.wikipathway.model.Graph=info
+#Set root logger 's level and its appender to an appender called CONSOLE which is defined below.
+log4j.rootLogger=info, CONSOLE, R
+
+#Set the behavior of the CONSOLE appender 
+log4j.appender.CONSOLE=org.apache.log4j.ConsoleAppender
+log4j.appender.CONSOLE.layout=org.apache.log4j.PatternLayout
+log4j.appender.CONSOLE.layout.ConversionPattern=%d %5p [%t] (%F:%L) - %m%n
+#log4j.appender.CONSOLE.layout.ConversionPattern=%m%n
+
+
+#Set the behavior of the FILE appender 
+log4j.appender.R=org.apache.log4j.FileAppender
+log4j.appender.R.File=${catalina.home}/logs/MapViewer.log
+log4j.appender.R.layout=org.apache.log4j.PatternLayout
+log4j.appender.R.layout.ConversionPattern=%d %5p [%t] (%F:%L) - %m%n
+
+
+log4j.logger.org.springframework=warn
+log4j.logger.org.hibernate=warn
+log4j.logger.lcsb=debug
+#log4j.logger.lcsb.mapviewer.model=info
+#log4j.logger.lcsb.mapviewer.wikipathway.model.Graph=info